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A systems biology approach to dynamic modeling and inter-subject variability of statin pharmacokinetics in human hepatocytes
BACKGROUND: The individual character of pharmacokinetics is of great importance in the risk assessment of new drug leads in pharmacological research. Amongst others, it is severely influenced by the properties and inter-individual variability of the enzymes and transporters of the drug detoxificatio...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3117731/ https://www.ncbi.nlm.nih.gov/pubmed/21548957 http://dx.doi.org/10.1186/1752-0509-5-66 |
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author | Bucher, Joachim Riedmaier, Stephan Schnabel, Anke Marcus, Katrin Vacun, Gabriele Weiss, Thomas S Thasler, Wolfgang E Nüssler, Andreas K Zanger, Ulrich M Reuss, Matthias |
author_facet | Bucher, Joachim Riedmaier, Stephan Schnabel, Anke Marcus, Katrin Vacun, Gabriele Weiss, Thomas S Thasler, Wolfgang E Nüssler, Andreas K Zanger, Ulrich M Reuss, Matthias |
author_sort | Bucher, Joachim |
collection | PubMed |
description | BACKGROUND: The individual character of pharmacokinetics is of great importance in the risk assessment of new drug leads in pharmacological research. Amongst others, it is severely influenced by the properties and inter-individual variability of the enzymes and transporters of the drug detoxification system of the liver. Predicting individual drug biotransformation capacity requires quantitative and detailed models. RESULTS: In this contribution we present the de novo deterministic modeling of atorvastatin biotransformation based on comprehensive published knowledge on involved metabolic and transport pathways as well as physicochemical properties. The model was evaluated on primary human hepatocytes and parameter identifiability analysis was performed under multiple experimental constraints. Dynamic simulations of atorvastatin biotransformation considering the inter-individual variability of the two major involved enzymes CYP3A4 and UGT1A3 based on quantitative protein expression data in a large human liver bank (n = 150) highlighted the variability in the individual biotransformation profiles and therefore also points to the individuality of pharmacokinetics. CONCLUSIONS: A dynamic model for the biotransformation of atorvastatin has been developed using quantitative metabolite measurements in primary human hepatocytes. The model comprises kinetics for transport processes and metabolic enzymes as well as population liver expression data allowing us to assess the impact of inter-individual variability of concentrations of key proteins. Application of computational tools for parameter sensitivity analysis enabled us to considerably improve the validity of the model and to create a consistent framework for precise computer-aided simulations in toxicology. |
format | Online Article Text |
id | pubmed-3117731 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-31177312011-06-18 A systems biology approach to dynamic modeling and inter-subject variability of statin pharmacokinetics in human hepatocytes Bucher, Joachim Riedmaier, Stephan Schnabel, Anke Marcus, Katrin Vacun, Gabriele Weiss, Thomas S Thasler, Wolfgang E Nüssler, Andreas K Zanger, Ulrich M Reuss, Matthias BMC Syst Biol Research Article BACKGROUND: The individual character of pharmacokinetics is of great importance in the risk assessment of new drug leads in pharmacological research. Amongst others, it is severely influenced by the properties and inter-individual variability of the enzymes and transporters of the drug detoxification system of the liver. Predicting individual drug biotransformation capacity requires quantitative and detailed models. RESULTS: In this contribution we present the de novo deterministic modeling of atorvastatin biotransformation based on comprehensive published knowledge on involved metabolic and transport pathways as well as physicochemical properties. The model was evaluated on primary human hepatocytes and parameter identifiability analysis was performed under multiple experimental constraints. Dynamic simulations of atorvastatin biotransformation considering the inter-individual variability of the two major involved enzymes CYP3A4 and UGT1A3 based on quantitative protein expression data in a large human liver bank (n = 150) highlighted the variability in the individual biotransformation profiles and therefore also points to the individuality of pharmacokinetics. CONCLUSIONS: A dynamic model for the biotransformation of atorvastatin has been developed using quantitative metabolite measurements in primary human hepatocytes. The model comprises kinetics for transport processes and metabolic enzymes as well as population liver expression data allowing us to assess the impact of inter-individual variability of concentrations of key proteins. Application of computational tools for parameter sensitivity analysis enabled us to considerably improve the validity of the model and to create a consistent framework for precise computer-aided simulations in toxicology. BioMed Central 2011-05-06 /pmc/articles/PMC3117731/ /pubmed/21548957 http://dx.doi.org/10.1186/1752-0509-5-66 Text en Copyright © 2011 Bucher et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Bucher, Joachim Riedmaier, Stephan Schnabel, Anke Marcus, Katrin Vacun, Gabriele Weiss, Thomas S Thasler, Wolfgang E Nüssler, Andreas K Zanger, Ulrich M Reuss, Matthias A systems biology approach to dynamic modeling and inter-subject variability of statin pharmacokinetics in human hepatocytes |
title | A systems biology approach to dynamic modeling and inter-subject variability of statin pharmacokinetics in human hepatocytes |
title_full | A systems biology approach to dynamic modeling and inter-subject variability of statin pharmacokinetics in human hepatocytes |
title_fullStr | A systems biology approach to dynamic modeling and inter-subject variability of statin pharmacokinetics in human hepatocytes |
title_full_unstemmed | A systems biology approach to dynamic modeling and inter-subject variability of statin pharmacokinetics in human hepatocytes |
title_short | A systems biology approach to dynamic modeling and inter-subject variability of statin pharmacokinetics in human hepatocytes |
title_sort | systems biology approach to dynamic modeling and inter-subject variability of statin pharmacokinetics in human hepatocytes |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3117731/ https://www.ncbi.nlm.nih.gov/pubmed/21548957 http://dx.doi.org/10.1186/1752-0509-5-66 |
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