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Blood Signature of Pre-Heart Failure: A Microarrays Study
BACKGROUND: The preclinical stage of systolic heart failure (HF), known as asymptomatic left ventricular dysfunction (ALVD), is diagnosed only by echocardiography, frequent in the general population and leads to a high risk of developing severe HF. Large scale screening for ALVD is a difficult task...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3123284/ https://www.ncbi.nlm.nih.gov/pubmed/21731613 http://dx.doi.org/10.1371/journal.pone.0020414 |
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author | Smih, Fatima Desmoulin, Franck Berry, Matthieu Turkieh, Annie Harmancey, Romain Iacovoni, Jason Trouillet, Charlotte Delmas, Clement Pathak, Atul Lairez, Olivier Koukoui, François Massabuau, Pierre Ferrieres, Jean Galinier, Michel Rouet, Philippe |
author_facet | Smih, Fatima Desmoulin, Franck Berry, Matthieu Turkieh, Annie Harmancey, Romain Iacovoni, Jason Trouillet, Charlotte Delmas, Clement Pathak, Atul Lairez, Olivier Koukoui, François Massabuau, Pierre Ferrieres, Jean Galinier, Michel Rouet, Philippe |
author_sort | Smih, Fatima |
collection | PubMed |
description | BACKGROUND: The preclinical stage of systolic heart failure (HF), known as asymptomatic left ventricular dysfunction (ALVD), is diagnosed only by echocardiography, frequent in the general population and leads to a high risk of developing severe HF. Large scale screening for ALVD is a difficult task and represents a major unmet clinical challenge that requires the determination of ALVD biomarkers. METHODOLOGY/PRINCIPAL FINDINGS: 294 individuals were screened by echocardiography. We identified 9 ALVD cases out of 128 subjects with cardiovascular risk factors. White blood cell gene expression profiling was performed using pangenomic microarrays. Data were analyzed using principal component analysis (PCA) and Significant Analysis of Microarrays (SAM). To build an ALVD classifier model, we used the nearest centroid classification method (NCCM) with the ClaNC software package. Classification performance was determined using the leave-one-out cross-validation method. Blood transcriptome analysis provided a specific molecular signature for ALVD which defined a model based on 7 genes capable of discriminating ALVD cases. Analysis of an ALVD patients validation group demonstrated that these genes are accurate diagnostic predictors for ALVD with 87% accuracy and 100% precision. Furthermore, Receiver Operating Characteristic curves of expression levels confirmed that 6 out of 7 genes discriminate for left ventricular dysfunction classification. CONCLUSIONS/SIGNIFICANCE: These targets could serve to enhance the ability to efficiently detect ALVD by general care practitioners to facilitate preemptive initiation of medical treatment preventing the development of HF. |
format | Online Article Text |
id | pubmed-3123284 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-31232842011-06-30 Blood Signature of Pre-Heart Failure: A Microarrays Study Smih, Fatima Desmoulin, Franck Berry, Matthieu Turkieh, Annie Harmancey, Romain Iacovoni, Jason Trouillet, Charlotte Delmas, Clement Pathak, Atul Lairez, Olivier Koukoui, François Massabuau, Pierre Ferrieres, Jean Galinier, Michel Rouet, Philippe PLoS One Research Article BACKGROUND: The preclinical stage of systolic heart failure (HF), known as asymptomatic left ventricular dysfunction (ALVD), is diagnosed only by echocardiography, frequent in the general population and leads to a high risk of developing severe HF. Large scale screening for ALVD is a difficult task and represents a major unmet clinical challenge that requires the determination of ALVD biomarkers. METHODOLOGY/PRINCIPAL FINDINGS: 294 individuals were screened by echocardiography. We identified 9 ALVD cases out of 128 subjects with cardiovascular risk factors. White blood cell gene expression profiling was performed using pangenomic microarrays. Data were analyzed using principal component analysis (PCA) and Significant Analysis of Microarrays (SAM). To build an ALVD classifier model, we used the nearest centroid classification method (NCCM) with the ClaNC software package. Classification performance was determined using the leave-one-out cross-validation method. Blood transcriptome analysis provided a specific molecular signature for ALVD which defined a model based on 7 genes capable of discriminating ALVD cases. Analysis of an ALVD patients validation group demonstrated that these genes are accurate diagnostic predictors for ALVD with 87% accuracy and 100% precision. Furthermore, Receiver Operating Characteristic curves of expression levels confirmed that 6 out of 7 genes discriminate for left ventricular dysfunction classification. CONCLUSIONS/SIGNIFICANCE: These targets could serve to enhance the ability to efficiently detect ALVD by general care practitioners to facilitate preemptive initiation of medical treatment preventing the development of HF. Public Library of Science 2011-06-24 /pmc/articles/PMC3123284/ /pubmed/21731613 http://dx.doi.org/10.1371/journal.pone.0020414 Text en Smih et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Smih, Fatima Desmoulin, Franck Berry, Matthieu Turkieh, Annie Harmancey, Romain Iacovoni, Jason Trouillet, Charlotte Delmas, Clement Pathak, Atul Lairez, Olivier Koukoui, François Massabuau, Pierre Ferrieres, Jean Galinier, Michel Rouet, Philippe Blood Signature of Pre-Heart Failure: A Microarrays Study |
title | Blood Signature of Pre-Heart Failure: A Microarrays Study |
title_full | Blood Signature of Pre-Heart Failure: A Microarrays Study |
title_fullStr | Blood Signature of Pre-Heart Failure: A Microarrays Study |
title_full_unstemmed | Blood Signature of Pre-Heart Failure: A Microarrays Study |
title_short | Blood Signature of Pre-Heart Failure: A Microarrays Study |
title_sort | blood signature of pre-heart failure: a microarrays study |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3123284/ https://www.ncbi.nlm.nih.gov/pubmed/21731613 http://dx.doi.org/10.1371/journal.pone.0020414 |
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