Cargando…

Blood Signature of Pre-Heart Failure: A Microarrays Study

BACKGROUND: The preclinical stage of systolic heart failure (HF), known as asymptomatic left ventricular dysfunction (ALVD), is diagnosed only by echocardiography, frequent in the general population and leads to a high risk of developing severe HF. Large scale screening for ALVD is a difficult task...

Descripción completa

Detalles Bibliográficos
Autores principales: Smih, Fatima, Desmoulin, Franck, Berry, Matthieu, Turkieh, Annie, Harmancey, Romain, Iacovoni, Jason, Trouillet, Charlotte, Delmas, Clement, Pathak, Atul, Lairez, Olivier, Koukoui, François, Massabuau, Pierre, Ferrieres, Jean, Galinier, Michel, Rouet, Philippe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3123284/
https://www.ncbi.nlm.nih.gov/pubmed/21731613
http://dx.doi.org/10.1371/journal.pone.0020414
_version_ 1782206961158193152
author Smih, Fatima
Desmoulin, Franck
Berry, Matthieu
Turkieh, Annie
Harmancey, Romain
Iacovoni, Jason
Trouillet, Charlotte
Delmas, Clement
Pathak, Atul
Lairez, Olivier
Koukoui, François
Massabuau, Pierre
Ferrieres, Jean
Galinier, Michel
Rouet, Philippe
author_facet Smih, Fatima
Desmoulin, Franck
Berry, Matthieu
Turkieh, Annie
Harmancey, Romain
Iacovoni, Jason
Trouillet, Charlotte
Delmas, Clement
Pathak, Atul
Lairez, Olivier
Koukoui, François
Massabuau, Pierre
Ferrieres, Jean
Galinier, Michel
Rouet, Philippe
author_sort Smih, Fatima
collection PubMed
description BACKGROUND: The preclinical stage of systolic heart failure (HF), known as asymptomatic left ventricular dysfunction (ALVD), is diagnosed only by echocardiography, frequent in the general population and leads to a high risk of developing severe HF. Large scale screening for ALVD is a difficult task and represents a major unmet clinical challenge that requires the determination of ALVD biomarkers. METHODOLOGY/PRINCIPAL FINDINGS: 294 individuals were screened by echocardiography. We identified 9 ALVD cases out of 128 subjects with cardiovascular risk factors. White blood cell gene expression profiling was performed using pangenomic microarrays. Data were analyzed using principal component analysis (PCA) and Significant Analysis of Microarrays (SAM). To build an ALVD classifier model, we used the nearest centroid classification method (NCCM) with the ClaNC software package. Classification performance was determined using the leave-one-out cross-validation method. Blood transcriptome analysis provided a specific molecular signature for ALVD which defined a model based on 7 genes capable of discriminating ALVD cases. Analysis of an ALVD patients validation group demonstrated that these genes are accurate diagnostic predictors for ALVD with 87% accuracy and 100% precision. Furthermore, Receiver Operating Characteristic curves of expression levels confirmed that 6 out of 7 genes discriminate for left ventricular dysfunction classification. CONCLUSIONS/SIGNIFICANCE: These targets could serve to enhance the ability to efficiently detect ALVD by general care practitioners to facilitate preemptive initiation of medical treatment preventing the development of HF.
format Online
Article
Text
id pubmed-3123284
institution National Center for Biotechnology Information
language English
publishDate 2011
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-31232842011-06-30 Blood Signature of Pre-Heart Failure: A Microarrays Study Smih, Fatima Desmoulin, Franck Berry, Matthieu Turkieh, Annie Harmancey, Romain Iacovoni, Jason Trouillet, Charlotte Delmas, Clement Pathak, Atul Lairez, Olivier Koukoui, François Massabuau, Pierre Ferrieres, Jean Galinier, Michel Rouet, Philippe PLoS One Research Article BACKGROUND: The preclinical stage of systolic heart failure (HF), known as asymptomatic left ventricular dysfunction (ALVD), is diagnosed only by echocardiography, frequent in the general population and leads to a high risk of developing severe HF. Large scale screening for ALVD is a difficult task and represents a major unmet clinical challenge that requires the determination of ALVD biomarkers. METHODOLOGY/PRINCIPAL FINDINGS: 294 individuals were screened by echocardiography. We identified 9 ALVD cases out of 128 subjects with cardiovascular risk factors. White blood cell gene expression profiling was performed using pangenomic microarrays. Data were analyzed using principal component analysis (PCA) and Significant Analysis of Microarrays (SAM). To build an ALVD classifier model, we used the nearest centroid classification method (NCCM) with the ClaNC software package. Classification performance was determined using the leave-one-out cross-validation method. Blood transcriptome analysis provided a specific molecular signature for ALVD which defined a model based on 7 genes capable of discriminating ALVD cases. Analysis of an ALVD patients validation group demonstrated that these genes are accurate diagnostic predictors for ALVD with 87% accuracy and 100% precision. Furthermore, Receiver Operating Characteristic curves of expression levels confirmed that 6 out of 7 genes discriminate for left ventricular dysfunction classification. CONCLUSIONS/SIGNIFICANCE: These targets could serve to enhance the ability to efficiently detect ALVD by general care practitioners to facilitate preemptive initiation of medical treatment preventing the development of HF. Public Library of Science 2011-06-24 /pmc/articles/PMC3123284/ /pubmed/21731613 http://dx.doi.org/10.1371/journal.pone.0020414 Text en Smih et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Smih, Fatima
Desmoulin, Franck
Berry, Matthieu
Turkieh, Annie
Harmancey, Romain
Iacovoni, Jason
Trouillet, Charlotte
Delmas, Clement
Pathak, Atul
Lairez, Olivier
Koukoui, François
Massabuau, Pierre
Ferrieres, Jean
Galinier, Michel
Rouet, Philippe
Blood Signature of Pre-Heart Failure: A Microarrays Study
title Blood Signature of Pre-Heart Failure: A Microarrays Study
title_full Blood Signature of Pre-Heart Failure: A Microarrays Study
title_fullStr Blood Signature of Pre-Heart Failure: A Microarrays Study
title_full_unstemmed Blood Signature of Pre-Heart Failure: A Microarrays Study
title_short Blood Signature of Pre-Heart Failure: A Microarrays Study
title_sort blood signature of pre-heart failure: a microarrays study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3123284/
https://www.ncbi.nlm.nih.gov/pubmed/21731613
http://dx.doi.org/10.1371/journal.pone.0020414
work_keys_str_mv AT smihfatima bloodsignatureofpreheartfailureamicroarraysstudy
AT desmoulinfranck bloodsignatureofpreheartfailureamicroarraysstudy
AT berrymatthieu bloodsignatureofpreheartfailureamicroarraysstudy
AT turkiehannie bloodsignatureofpreheartfailureamicroarraysstudy
AT harmanceyromain bloodsignatureofpreheartfailureamicroarraysstudy
AT iacovonijason bloodsignatureofpreheartfailureamicroarraysstudy
AT trouilletcharlotte bloodsignatureofpreheartfailureamicroarraysstudy
AT delmasclement bloodsignatureofpreheartfailureamicroarraysstudy
AT pathakatul bloodsignatureofpreheartfailureamicroarraysstudy
AT lairezolivier bloodsignatureofpreheartfailureamicroarraysstudy
AT koukouifrancois bloodsignatureofpreheartfailureamicroarraysstudy
AT massabuaupierre bloodsignatureofpreheartfailureamicroarraysstudy
AT ferrieresjean bloodsignatureofpreheartfailureamicroarraysstudy
AT galiniermichel bloodsignatureofpreheartfailureamicroarraysstudy
AT rouetphilippe bloodsignatureofpreheartfailureamicroarraysstudy