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PepServe: a web server for peptide analysis, clustering and visualization

Peptides, either as protein fragments or as naturally occurring entities are characterized by their sequence and function features. Many times the researchers need to massively manage peptide lists concerning protein identification, biomarker discovery, bioactivity, immune response or other function...

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Detalles Bibliográficos
Autores principales: Alexandridou, Anastasia, Dovrolis, Nikolas, Tsangaris, George Th., Nikita, Konstantina, Spyrou, George
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3125752/
https://www.ncbi.nlm.nih.gov/pubmed/21572105
http://dx.doi.org/10.1093/nar/gkr318
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author Alexandridou, Anastasia
Dovrolis, Nikolas
Tsangaris, George Th.
Nikita, Konstantina
Spyrou, George
author_facet Alexandridou, Anastasia
Dovrolis, Nikolas
Tsangaris, George Th.
Nikita, Konstantina
Spyrou, George
author_sort Alexandridou, Anastasia
collection PubMed
description Peptides, either as protein fragments or as naturally occurring entities are characterized by their sequence and function features. Many times the researchers need to massively manage peptide lists concerning protein identification, biomarker discovery, bioactivity, immune response or other functionalities. We present a web server that manages peptide lists in terms of feature analysis as well as interactive clustering and visualization of the given peptides. PepServe is a useful tool in the understanding of the peptide feature distribution among a group of peptides. The PepServe web application is freely available at http://bioserver-1.bioacademy.gr/Bioserver/PepServe/.
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spelling pubmed-31257522011-07-05 PepServe: a web server for peptide analysis, clustering and visualization Alexandridou, Anastasia Dovrolis, Nikolas Tsangaris, George Th. Nikita, Konstantina Spyrou, George Nucleic Acids Res Articles Peptides, either as protein fragments or as naturally occurring entities are characterized by their sequence and function features. Many times the researchers need to massively manage peptide lists concerning protein identification, biomarker discovery, bioactivity, immune response or other functionalities. We present a web server that manages peptide lists in terms of feature analysis as well as interactive clustering and visualization of the given peptides. PepServe is a useful tool in the understanding of the peptide feature distribution among a group of peptides. The PepServe web application is freely available at http://bioserver-1.bioacademy.gr/Bioserver/PepServe/. Oxford University Press 2011-07-01 2011-05-13 /pmc/articles/PMC3125752/ /pubmed/21572105 http://dx.doi.org/10.1093/nar/gkr318 Text en © The Author(s) 2011. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Alexandridou, Anastasia
Dovrolis, Nikolas
Tsangaris, George Th.
Nikita, Konstantina
Spyrou, George
PepServe: a web server for peptide analysis, clustering and visualization
title PepServe: a web server for peptide analysis, clustering and visualization
title_full PepServe: a web server for peptide analysis, clustering and visualization
title_fullStr PepServe: a web server for peptide analysis, clustering and visualization
title_full_unstemmed PepServe: a web server for peptide analysis, clustering and visualization
title_short PepServe: a web server for peptide analysis, clustering and visualization
title_sort pepserve: a web server for peptide analysis, clustering and visualization
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3125752/
https://www.ncbi.nlm.nih.gov/pubmed/21572105
http://dx.doi.org/10.1093/nar/gkr318
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