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PepServe: a web server for peptide analysis, clustering and visualization
Peptides, either as protein fragments or as naturally occurring entities are characterized by their sequence and function features. Many times the researchers need to massively manage peptide lists concerning protein identification, biomarker discovery, bioactivity, immune response or other function...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3125752/ https://www.ncbi.nlm.nih.gov/pubmed/21572105 http://dx.doi.org/10.1093/nar/gkr318 |
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author | Alexandridou, Anastasia Dovrolis, Nikolas Tsangaris, George Th. Nikita, Konstantina Spyrou, George |
author_facet | Alexandridou, Anastasia Dovrolis, Nikolas Tsangaris, George Th. Nikita, Konstantina Spyrou, George |
author_sort | Alexandridou, Anastasia |
collection | PubMed |
description | Peptides, either as protein fragments or as naturally occurring entities are characterized by their sequence and function features. Many times the researchers need to massively manage peptide lists concerning protein identification, biomarker discovery, bioactivity, immune response or other functionalities. We present a web server that manages peptide lists in terms of feature analysis as well as interactive clustering and visualization of the given peptides. PepServe is a useful tool in the understanding of the peptide feature distribution among a group of peptides. The PepServe web application is freely available at http://bioserver-1.bioacademy.gr/Bioserver/PepServe/. |
format | Online Article Text |
id | pubmed-3125752 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-31257522011-07-05 PepServe: a web server for peptide analysis, clustering and visualization Alexandridou, Anastasia Dovrolis, Nikolas Tsangaris, George Th. Nikita, Konstantina Spyrou, George Nucleic Acids Res Articles Peptides, either as protein fragments or as naturally occurring entities are characterized by their sequence and function features. Many times the researchers need to massively manage peptide lists concerning protein identification, biomarker discovery, bioactivity, immune response or other functionalities. We present a web server that manages peptide lists in terms of feature analysis as well as interactive clustering and visualization of the given peptides. PepServe is a useful tool in the understanding of the peptide feature distribution among a group of peptides. The PepServe web application is freely available at http://bioserver-1.bioacademy.gr/Bioserver/PepServe/. Oxford University Press 2011-07-01 2011-05-13 /pmc/articles/PMC3125752/ /pubmed/21572105 http://dx.doi.org/10.1093/nar/gkr318 Text en © The Author(s) 2011. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Alexandridou, Anastasia Dovrolis, Nikolas Tsangaris, George Th. Nikita, Konstantina Spyrou, George PepServe: a web server for peptide analysis, clustering and visualization |
title | PepServe: a web server for peptide analysis, clustering and visualization |
title_full | PepServe: a web server for peptide analysis, clustering and visualization |
title_fullStr | PepServe: a web server for peptide analysis, clustering and visualization |
title_full_unstemmed | PepServe: a web server for peptide analysis, clustering and visualization |
title_short | PepServe: a web server for peptide analysis, clustering and visualization |
title_sort | pepserve: a web server for peptide analysis, clustering and visualization |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3125752/ https://www.ncbi.nlm.nih.gov/pubmed/21572105 http://dx.doi.org/10.1093/nar/gkr318 |
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