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BioProfiling.de: analytical web portal for high-throughput cell biology

BioProfiling.de provides a comprehensive analytical toolkit for the interpretation gene/protein lists. As input, BioProfiling.de accepts a gene/protein list. As output, in one submission, the gene list is analyzed by a collection of tools which employs advanced enrichment or network-based statistica...

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Detalles Bibliográficos
Autor principal: Antonov, Alexey V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3125774/
https://www.ncbi.nlm.nih.gov/pubmed/21609949
http://dx.doi.org/10.1093/nar/gkr372
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author Antonov, Alexey V.
author_facet Antonov, Alexey V.
author_sort Antonov, Alexey V.
collection PubMed
description BioProfiling.de provides a comprehensive analytical toolkit for the interpretation gene/protein lists. As input, BioProfiling.de accepts a gene/protein list. As output, in one submission, the gene list is analyzed by a collection of tools which employs advanced enrichment or network-based statistical frameworks. The gene list is profiled with respect to the most information available regarding gene function, protein interactions, pathway relationships, in silico predicted microRNA to gene associations, as well as, information collected by text mining. BioProfiling.de provides a user friendly dialog-driven web interface for several model organisms and supports most available gene identifiers. The web portal is freely available at http://www.BioProfiling.de/gene_list.
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spelling pubmed-31257742011-07-05 BioProfiling.de: analytical web portal for high-throughput cell biology Antonov, Alexey V. Nucleic Acids Res Articles BioProfiling.de provides a comprehensive analytical toolkit for the interpretation gene/protein lists. As input, BioProfiling.de accepts a gene/protein list. As output, in one submission, the gene list is analyzed by a collection of tools which employs advanced enrichment or network-based statistical frameworks. The gene list is profiled with respect to the most information available regarding gene function, protein interactions, pathway relationships, in silico predicted microRNA to gene associations, as well as, information collected by text mining. BioProfiling.de provides a user friendly dialog-driven web interface for several model organisms and supports most available gene identifiers. The web portal is freely available at http://www.BioProfiling.de/gene_list. Oxford University Press 2011-07-01 2011-05-23 /pmc/articles/PMC3125774/ /pubmed/21609949 http://dx.doi.org/10.1093/nar/gkr372 Text en © The Author(s) 2011. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Antonov, Alexey V.
BioProfiling.de: analytical web portal for high-throughput cell biology
title BioProfiling.de: analytical web portal for high-throughput cell biology
title_full BioProfiling.de: analytical web portal for high-throughput cell biology
title_fullStr BioProfiling.de: analytical web portal for high-throughput cell biology
title_full_unstemmed BioProfiling.de: analytical web portal for high-throughput cell biology
title_short BioProfiling.de: analytical web portal for high-throughput cell biology
title_sort bioprofiling.de: analytical web portal for high-throughput cell biology
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3125774/
https://www.ncbi.nlm.nih.gov/pubmed/21609949
http://dx.doi.org/10.1093/nar/gkr372
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