Cargando…

A Flexible Approach for Highly Multiplexed Candidate Gene Targeted Resequencing

We have developed an integrated strategy for targeted resequencing and analysis of gene subsets from the human exome for variants. Our capture technology is geared towards resequencing gene subsets substantially larger than can be done efficiently with simplex or multiplex PCR but smaller in scale t...

Descripción completa

Detalles Bibliográficos
Autores principales:	Natsoulis, Georges, Bell, John M., Xu, Hua, Buenrostro, Jason D., Ordonez, Heather, Grimes, Susan, Newburger, Daniel, Jensen, Michael, Zahn, Jacob M., Zhang, Nancy, Ji, Hanlee P.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2011
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3127857/ https://www.ncbi.nlm.nih.gov/pubmed/21738606 http://dx.doi.org/10.1371/journal.pone.0021088

Ejemplares similares

The Human OligoGenome Resource: a database of oligonucleotide capture probes for resequencing target regions across the human genome
por: Newburger, Daniel E., et al.
Publicado: (2012)

Ultrasensitive detection of rare mutations using next-generation targeted resequencing
por: Flaherty, Patrick, et al.
Publicado: (2012)

Identification of Insertion Deletion Mutations from Deep Targeted Resequencing
por: Natsoulis, Georges, et al.
Publicado: (2013)

A cross-sample statistical model for SNP detection in short-read sequencing data
por: Muralidharan, Omkar, et al.
Publicado: (2012)

A programmable method for massively parallel targeted sequencing
por: Hopmans, Erik S., et al.
Publicado: (2014)

Targeted sequencing library preparation by genomic DNA circularization
por: Myllykangas, Samuel, et al.
Publicado: (2011)

Multiplex bisulfite PCR resequencing of clinical FFPE DNA
por: Korbie, Darren, et al.
Publicado: (2015)

MultiplexSSR: A pipeline for developing multiplex SSR‐PCR assays from resequencing data
por: Guo, Liang, et al.
Publicado: (2020)

RVD: a command-line program for ultrasensitive rare single nucleotide variant detection using targeted next-generation DNA resequencing
por: Cushing, Anna, et al.
Publicado: (2013)

Targeted resequencing of candidate genes using selector probes
por: Johansson, H., et al.
Publicado: (2011)

Quantification of differential gene expression by multiplexed targeted resequencing of cDNA
por: Arts, Peer, et al.
Publicado: (2017)

Association of targeted multiplex PCR with resequencing microarray for the detection of multiple respiratory pathogens
por: Shen, Hongwei, et al.
Publicado: (2015)

Deep resequencing identifies candidate functional genes in leprosy GWAS loci
por: Fava, Vinicius M., et al.
Publicado: (2021)

Identification of a biomarker panel using a multiplex proximity ligation assay improves accuracy of pancreatic cancer diagnosis
por: Chang, Stephanie T, et al.
Publicado: (2009)

Identification of candidate genes for drought tolerance by whole-genome resequencing in maize
por: Xu, Jie, et al.
Publicado: (2014)

Deep exon resequencing of DLGAP2 as a candidate gene of autism spectrum disorders
por: Chien, Wei-Hsien, et al.
Publicado: (2013)

MendeLIMS: a web-based laboratory information management system for clinical genome sequencing
por: Grimes, Susan M, et al.
Publicado: (2014)

Resequencing Three Candidate Genes for Major Depressive Disorder in a Dutch Cohort
por: Verbeek, Eva C., et al.
Publicado: (2013)

Targeted resequencing of candidate genes reveals novel variants associated with severe Behçet's uveitis
por: Kim, Sang Jin, et al.
Publicado: (2013)

Identification of candidate genes for leaf scorch in Populus deltoids by the whole genome resequencing analysis
por: Zhuang, Weibing, et al.
Publicado: (2018)

Identification of Key Candidate Genes for Beak Length Phenotype by Whole-Genome Resequencing in Geese
por: Huang, Jianhua, et al.
Publicado: (2022)

Metastatic tumor evolution and organoid modeling implicate TGFBR2 as a cancer driver in diffuse gastric cancer
por: Nadauld, Lincoln D, et al.
Publicado: (2014)

Population resequencing reveals candidate genes associated with salinity adaptation of the Pacific oyster Crassostrea gigas
por: She, Zhicai, et al.
Publicado: (2018)

Identification of Novel Loci and Candidate Genes for Resistance to Powdery Mildew in a Resequenced Cucumber Germplasm
por: Liu, Xiaoping, et al.
Publicado: (2021)

A genome-wide approach for detecting novel insertion-deletion variants of mid-range size
por: Xia, Li C., et al.
Publicado: (2016)

Molecular dissection of resistance gene cluster and candidate gene identification of Pl(17) and Pl(19) in sunflower by whole-genome resequencing
por: Ma, Guojia, et al.
Publicado: (2019)

Identifying Genome-Wide Sequence Variations and Candidate Genes Implicated in Self-Incompatibility by Resequencing Fragaria viridis
por: Du, Jianke, et al.
Publicado: (2019)

The Cancer Genome Atlas Clinical Explorer: a web and mobile interface for identifying clinical–genomic driver associations
por: Lee, HoJoon, et al.
Publicado: (2015)

Descripción de un multiplexer flexible FMX
por: Benitez Llorente, Raúl
Publicado: (2003)

CONTRA: copy number analysis for targeted resequencing
por: Li, Jason, et al.
Publicado: (2012)

N-acetyltransferase 8, a positional candidate for blood pressure and renal regulation: resequencing, association and in silico study
por: Juhanson, Peeter, et al.
Publicado: (2008)

Genome resequencing and bioinformatic analysis of SNP containing candidate genes in the autoimmune vitiligo Smyth line chicken model
por: Jang, Hyeon-Min, et al.
Publicado: (2014)

Evaluation of Polygenic Determinants of Non-Alcoholic Fatty Liver Disease (NAFLD) By a Candidate Genes Resequencing Strategy
por: Di Costanzo, Alessia, et al.
Publicado: (2018)

High-Density Mapping and Candidate Gene Analysis of Pl(18) and Pl(20) in Sunflower by Whole-Genome Resequencing
por: Ma, Guojia, et al.
Publicado: (2020)

Whole-Genome Resequencing Points to Candidate DNA Loci Affecting Body Temperature under Cold Stress in Siberian Cattle Populations
por: Igoshin, Alexander, et al.
Publicado: (2021)

Genotyping and Whole-Genome Resequencing of Welsh Sheep Breeds Reveal Candidate Genes and Variants for Adaptation to Local Environment and Socioeconomic Traits
por: Sweet-Jones, James, et al.
Publicado: (2021)

Using Targeted Resequencing for Identification of Candidate Genes and SNPs for a QTL Affecting the pH Value of Chicken Meat
por: Li, Xidan, et al.
Publicado: (2015)

Whole‐genome resequencing‐based QTL‐seq identified candidate genes and molecular markers for fresh seed dormancy in groundnut
por: Kumar, Rakesh, et al.
Publicado: (2019)

Whole genome resequencing and complementation tests reveal candidate loci contributing to bacterial wilt (Ralstonia sp.) resistance in tomato
por: Barchenger, Derek W., et al.
Publicado: (2022)

Identifying Candidate Genes for Short Gestation Length Trait in Chinese Qingping Pigs by Whole-Genome Resequencing and RNA Sequencing
por: Liu, Zezhang, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_k9m7qtocfbfn7ij50kqi072e30