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Heterogeneous Spectrum of CFTR Gene Mutations in Korean Patients with Cystic Fibrosis

BACKGROUND: Cystic fibrosis (CF) is one of the most common hereditary disorders among Caucasians. The most common mutations of the cystic fibrosis transmembrane conductance regulator (CFTR) gene have been well established among Caucasian populations. In Koreans, however, there are very few cases of...

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Autores principales: Jung, Haiyoung, Ki, Chang-Seok, Koh, Won-Jung, Ahn, Kang-Mo, Lee, Sang-Il, Kim, Jeong-Ho, Ko, Jae Sung, Seo, Jeong Kee, Cha, Seung-Ick, Lee, Eun-Sil, Kim, Jong-Won
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Korean Society for Laboratory Medicine 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3129356/
https://www.ncbi.nlm.nih.gov/pubmed/21779199
http://dx.doi.org/10.3343/kjlm.2011.31.3.219
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author Jung, Haiyoung
Ki, Chang-Seok
Koh, Won-Jung
Ahn, Kang-Mo
Lee, Sang-Il
Kim, Jeong-Ho
Ko, Jae Sung
Seo, Jeong Kee
Cha, Seung-Ick
Lee, Eun-Sil
Kim, Jong-Won
author_facet Jung, Haiyoung
Ki, Chang-Seok
Koh, Won-Jung
Ahn, Kang-Mo
Lee, Sang-Il
Kim, Jeong-Ho
Ko, Jae Sung
Seo, Jeong Kee
Cha, Seung-Ick
Lee, Eun-Sil
Kim, Jong-Won
author_sort Jung, Haiyoung
collection PubMed
description BACKGROUND: Cystic fibrosis (CF) is one of the most common hereditary disorders among Caucasians. The most common mutations of the cystic fibrosis transmembrane conductance regulator (CFTR) gene have been well established among Caucasian populations. In Koreans, however, there are very few cases of genetically confirmed CF thus far, and the spectrum of mutations seems quite different from that observed in Caucasians. METHODS: In the present study, we describe the cases of 2 Korean CF patients, present sequencing results identifying mutations in their CFTR gene, and summarize the results of CFTR mutational spectrum from previously reported Korean CF patients. The mutations described were identified by performing direct sequencing analysis of the complete coding regions and flanking intronic sequences of the CFTR gene, followed by multiplex ligation-dependent probe amplification (MLPA) analysis in order to detect gene deletions or duplications that could not be identified by a direct sequencing method. RESULTS: Three CFTR mutations were identified in the 2 patients, including p.Q98R, c.2052delA, and c.579+5G>A. In an analysis of 9 Korean CF patients that included the 2 patients presented in this study, p.Q98R mutation was the only recurrently observed mutation with a frequency of 18.8% (3/16 alleles). Furthermore, only one of the mutations (c.3272-26A>G) was found among the 32 common mutations in the screening panel for Caucasians from the Cystic Fibrosis Mutation Database. CONCLUSIONS: Sequencing of the entire CFTR gene followed by MLPA analysis, rather than using the targeted sequencing-based screening panel for mutations commonly found in Caucasian populations, is recommended for genetic analysis of Korean CF patients.
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spelling pubmed-31293562011-07-12 Heterogeneous Spectrum of CFTR Gene Mutations in Korean Patients with Cystic Fibrosis Jung, Haiyoung Ki, Chang-Seok Koh, Won-Jung Ahn, Kang-Mo Lee, Sang-Il Kim, Jeong-Ho Ko, Jae Sung Seo, Jeong Kee Cha, Seung-Ick Lee, Eun-Sil Kim, Jong-Won Korean J Lab Med Diagnostic Genetics BACKGROUND: Cystic fibrosis (CF) is one of the most common hereditary disorders among Caucasians. The most common mutations of the cystic fibrosis transmembrane conductance regulator (CFTR) gene have been well established among Caucasian populations. In Koreans, however, there are very few cases of genetically confirmed CF thus far, and the spectrum of mutations seems quite different from that observed in Caucasians. METHODS: In the present study, we describe the cases of 2 Korean CF patients, present sequencing results identifying mutations in their CFTR gene, and summarize the results of CFTR mutational spectrum from previously reported Korean CF patients. The mutations described were identified by performing direct sequencing analysis of the complete coding regions and flanking intronic sequences of the CFTR gene, followed by multiplex ligation-dependent probe amplification (MLPA) analysis in order to detect gene deletions or duplications that could not be identified by a direct sequencing method. RESULTS: Three CFTR mutations were identified in the 2 patients, including p.Q98R, c.2052delA, and c.579+5G>A. In an analysis of 9 Korean CF patients that included the 2 patients presented in this study, p.Q98R mutation was the only recurrently observed mutation with a frequency of 18.8% (3/16 alleles). Furthermore, only one of the mutations (c.3272-26A>G) was found among the 32 common mutations in the screening panel for Caucasians from the Cystic Fibrosis Mutation Database. CONCLUSIONS: Sequencing of the entire CFTR gene followed by MLPA analysis, rather than using the targeted sequencing-based screening panel for mutations commonly found in Caucasian populations, is recommended for genetic analysis of Korean CF patients. The Korean Society for Laboratory Medicine 2011-07 2011-06-28 /pmc/articles/PMC3129356/ /pubmed/21779199 http://dx.doi.org/10.3343/kjlm.2011.31.3.219 Text en Copyright © 2011 The Korean Society for Laboratory Medicine http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Diagnostic Genetics
Jung, Haiyoung
Ki, Chang-Seok
Koh, Won-Jung
Ahn, Kang-Mo
Lee, Sang-Il
Kim, Jeong-Ho
Ko, Jae Sung
Seo, Jeong Kee
Cha, Seung-Ick
Lee, Eun-Sil
Kim, Jong-Won
Heterogeneous Spectrum of CFTR Gene Mutations in Korean Patients with Cystic Fibrosis
title Heterogeneous Spectrum of CFTR Gene Mutations in Korean Patients with Cystic Fibrosis
title_full Heterogeneous Spectrum of CFTR Gene Mutations in Korean Patients with Cystic Fibrosis
title_fullStr Heterogeneous Spectrum of CFTR Gene Mutations in Korean Patients with Cystic Fibrosis
title_full_unstemmed Heterogeneous Spectrum of CFTR Gene Mutations in Korean Patients with Cystic Fibrosis
title_short Heterogeneous Spectrum of CFTR Gene Mutations in Korean Patients with Cystic Fibrosis
title_sort heterogeneous spectrum of cftr gene mutations in korean patients with cystic fibrosis
topic Diagnostic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3129356/
https://www.ncbi.nlm.nih.gov/pubmed/21779199
http://dx.doi.org/10.3343/kjlm.2011.31.3.219
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