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Heterogeneous Spectrum of CFTR Gene Mutations in Korean Patients with Cystic Fibrosis
BACKGROUND: Cystic fibrosis (CF) is one of the most common hereditary disorders among Caucasians. The most common mutations of the cystic fibrosis transmembrane conductance regulator (CFTR) gene have been well established among Caucasian populations. In Koreans, however, there are very few cases of...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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The Korean Society for Laboratory Medicine
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3129356/ https://www.ncbi.nlm.nih.gov/pubmed/21779199 http://dx.doi.org/10.3343/kjlm.2011.31.3.219 |
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author | Jung, Haiyoung Ki, Chang-Seok Koh, Won-Jung Ahn, Kang-Mo Lee, Sang-Il Kim, Jeong-Ho Ko, Jae Sung Seo, Jeong Kee Cha, Seung-Ick Lee, Eun-Sil Kim, Jong-Won |
author_facet | Jung, Haiyoung Ki, Chang-Seok Koh, Won-Jung Ahn, Kang-Mo Lee, Sang-Il Kim, Jeong-Ho Ko, Jae Sung Seo, Jeong Kee Cha, Seung-Ick Lee, Eun-Sil Kim, Jong-Won |
author_sort | Jung, Haiyoung |
collection | PubMed |
description | BACKGROUND: Cystic fibrosis (CF) is one of the most common hereditary disorders among Caucasians. The most common mutations of the cystic fibrosis transmembrane conductance regulator (CFTR) gene have been well established among Caucasian populations. In Koreans, however, there are very few cases of genetically confirmed CF thus far, and the spectrum of mutations seems quite different from that observed in Caucasians. METHODS: In the present study, we describe the cases of 2 Korean CF patients, present sequencing results identifying mutations in their CFTR gene, and summarize the results of CFTR mutational spectrum from previously reported Korean CF patients. The mutations described were identified by performing direct sequencing analysis of the complete coding regions and flanking intronic sequences of the CFTR gene, followed by multiplex ligation-dependent probe amplification (MLPA) analysis in order to detect gene deletions or duplications that could not be identified by a direct sequencing method. RESULTS: Three CFTR mutations were identified in the 2 patients, including p.Q98R, c.2052delA, and c.579+5G>A. In an analysis of 9 Korean CF patients that included the 2 patients presented in this study, p.Q98R mutation was the only recurrently observed mutation with a frequency of 18.8% (3/16 alleles). Furthermore, only one of the mutations (c.3272-26A>G) was found among the 32 common mutations in the screening panel for Caucasians from the Cystic Fibrosis Mutation Database. CONCLUSIONS: Sequencing of the entire CFTR gene followed by MLPA analysis, rather than using the targeted sequencing-based screening panel for mutations commonly found in Caucasian populations, is recommended for genetic analysis of Korean CF patients. |
format | Online Article Text |
id | pubmed-3129356 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | The Korean Society for Laboratory Medicine |
record_format | MEDLINE/PubMed |
spelling | pubmed-31293562011-07-12 Heterogeneous Spectrum of CFTR Gene Mutations in Korean Patients with Cystic Fibrosis Jung, Haiyoung Ki, Chang-Seok Koh, Won-Jung Ahn, Kang-Mo Lee, Sang-Il Kim, Jeong-Ho Ko, Jae Sung Seo, Jeong Kee Cha, Seung-Ick Lee, Eun-Sil Kim, Jong-Won Korean J Lab Med Diagnostic Genetics BACKGROUND: Cystic fibrosis (CF) is one of the most common hereditary disorders among Caucasians. The most common mutations of the cystic fibrosis transmembrane conductance regulator (CFTR) gene have been well established among Caucasian populations. In Koreans, however, there are very few cases of genetically confirmed CF thus far, and the spectrum of mutations seems quite different from that observed in Caucasians. METHODS: In the present study, we describe the cases of 2 Korean CF patients, present sequencing results identifying mutations in their CFTR gene, and summarize the results of CFTR mutational spectrum from previously reported Korean CF patients. The mutations described were identified by performing direct sequencing analysis of the complete coding regions and flanking intronic sequences of the CFTR gene, followed by multiplex ligation-dependent probe amplification (MLPA) analysis in order to detect gene deletions or duplications that could not be identified by a direct sequencing method. RESULTS: Three CFTR mutations were identified in the 2 patients, including p.Q98R, c.2052delA, and c.579+5G>A. In an analysis of 9 Korean CF patients that included the 2 patients presented in this study, p.Q98R mutation was the only recurrently observed mutation with a frequency of 18.8% (3/16 alleles). Furthermore, only one of the mutations (c.3272-26A>G) was found among the 32 common mutations in the screening panel for Caucasians from the Cystic Fibrosis Mutation Database. CONCLUSIONS: Sequencing of the entire CFTR gene followed by MLPA analysis, rather than using the targeted sequencing-based screening panel for mutations commonly found in Caucasian populations, is recommended for genetic analysis of Korean CF patients. The Korean Society for Laboratory Medicine 2011-07 2011-06-28 /pmc/articles/PMC3129356/ /pubmed/21779199 http://dx.doi.org/10.3343/kjlm.2011.31.3.219 Text en Copyright © 2011 The Korean Society for Laboratory Medicine http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Diagnostic Genetics Jung, Haiyoung Ki, Chang-Seok Koh, Won-Jung Ahn, Kang-Mo Lee, Sang-Il Kim, Jeong-Ho Ko, Jae Sung Seo, Jeong Kee Cha, Seung-Ick Lee, Eun-Sil Kim, Jong-Won Heterogeneous Spectrum of CFTR Gene Mutations in Korean Patients with Cystic Fibrosis |
title | Heterogeneous Spectrum of CFTR Gene Mutations in Korean Patients with Cystic Fibrosis |
title_full | Heterogeneous Spectrum of CFTR Gene Mutations in Korean Patients with Cystic Fibrosis |
title_fullStr | Heterogeneous Spectrum of CFTR Gene Mutations in Korean Patients with Cystic Fibrosis |
title_full_unstemmed | Heterogeneous Spectrum of CFTR Gene Mutations in Korean Patients with Cystic Fibrosis |
title_short | Heterogeneous Spectrum of CFTR Gene Mutations in Korean Patients with Cystic Fibrosis |
title_sort | heterogeneous spectrum of cftr gene mutations in korean patients with cystic fibrosis |
topic | Diagnostic Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3129356/ https://www.ncbi.nlm.nih.gov/pubmed/21779199 http://dx.doi.org/10.3343/kjlm.2011.31.3.219 |
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