Cargando…

The Caenorhabditis elegans intermediate-size transcriptome shows high degree of stage-specific expression

Earlier studies have revealed a substantial amount of transcriptional activity occurring outside annotated protein-coding genes of the Caenorhabditis elegans genome. One important fraction of this transcriptional activity relates to intermediate-size (70–500 nt) transcripts (is-ncRNAs) of mostly unk...

Descripción completa

Detalles Bibliográficos
Autores principales:	Wang, Yunfei, Chen, Jingjing, Wei, Guifeng, He, Housheng, Zhu, Xiaopeng, Xiao, Tengfei, Yuan, Jiao, Dong, Bo, He, Shunmin, Skogerbø, Geir, Chen, Runsheng
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2011
Materias:	RNA
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3130273/ https://www.ncbi.nlm.nih.gov/pubmed/21378118 http://dx.doi.org/10.1093/nar/gkr102

Ejemplares similares

In vivo analysis of Caenorhabditis elegans noncoding RNA promoter motifs
por: Li, Tiantian, et al.
Publicado: (2008)

Microarray analysis of ncRNA expression patterns in Caenorhabditis elegans after RNAi against snoRNA associated proteins
por: Aftab, Muhammad Nauman, et al.
Publicado: (2008)

Systematic identification of non-coding RNA 2,2,7-trimethylguanosine cap structures in Caenorhabditis elegans
por: Jia, Dong, et al.
Publicado: (2007)

Profiling Caenorhabditis elegans non-coding RNA expression with a combined microarray
por: He, Housheng, et al.
Publicado: (2006)

MicroRNA-encoding long non-coding RNAs
por: He, Shunmin, et al.
Publicado: (2008)

Genome-scale identification of Caenorhabditis elegans regulatory elements by tiling-array mapping of DNase I hypersensitive sites
por: Shi, Baochen, et al.
Publicado: (2009)

Systematic identification and characterization of chicken (Gallus gallus) ncRNAs
por: Zhang, Yong, et al.
Publicado: (2009)

Integrated Sequence-Structure Motifs Suffice to Identify microRNA Precursors
por: Liu, Xiuqin, et al.
Publicado: (2012)

Analysis of the p53/CEP-1 regulated non-coding transcriptome in C. elegans by an NSR-seq strategy
por: Xu, Derong, et al.
Publicado: (2014)

Regulatory elements of Caenorhabditis elegans ribosomal protein genes
por: Sleumer, Monica C, et al.
Publicado: (2012)

Co-regulation of alternative splicing by diverse splicing factors in Caenorhabditis elegans
por: Barberan-Soler, Sergio, et al.
Publicado: (2011)

Transcriptional inhibiton of Hoxd4 expression by miRNA-10a in human breast cancer cells
por: Tan, Yuliang, et al.
Publicado: (2009)

A small nucleolar RNA functions in rRNA processing in Caenorhabditis elegans
por: Hokii, Yusuke, et al.
Publicado: (2010)

Remodeling of the Caenorhabditis elegans non-coding RNA transcriptome by heat shock
por: Schreiner, William P, et al.
Publicado: (2019)

Experimental RNomics and genomic comparative analysis reveal a large group of species-specific small non-message RNAs in the silkworm Bombyx mori
por: Li, Dandan, et al.
Publicado: (2011)

miR-58 family and TGF-β pathways regulate each other in Caenorhabditis elegans
por: de Lucas, María Pilar, et al.
Publicado: (2015)

Identification of Intermediate-Size Non-Coding RNAs Involved in the UV-Induced DNA Damage Response in C. elegans
por: Li, Aqian, et al.
Publicado: (2012)

The microRNA miR-124 controls gene expression in the sensory nervous system of Caenorhabditis elegans
por: Clark, Alejandra M., et al.
Publicado: (2010)

ALG-5 is a miRNA-associated Argonaute required for proper developmental timing in the Caenorhabditis elegans germline
por: Brown, Kristen C., et al.
Publicado: (2017)

Engineering of a conditional allele reveals multiple roles of XRN2 in Caenorhabditis elegans development and substrate specificity in microRNA turnover
por: Miki, Takashi S., et al.
Publicado: (2014)

DHX34 and NBAS form part of an autoregulatory NMD circuit that regulates endogenous RNA targets in human cells, zebrafish and Caenorhabditis elegans
por: Longman, Dasa, et al.
Publicado: (2013)

Identification and Analysis of Intermediate Size Noncoding RNAs in the Human Fetal Brain
por: Yan, Dongsheng, et al.
Publicado: (2011)

Structure of the Caenorhabditis elegans m(6)A methyltransferase METT10 that regulates SAM homeostasis
por: Ju, Jue, et al.
Publicado: (2023)

TERRA expression is regulated by the telomere-binding proteins POT-1 and POT-2 in Caenorhabditis elegans
por: Manzato, Caterina, et al.
Publicado: (2023)

The type II poly(A)-binding protein PABP-2 genetically interacts with the let-7 miRNA and elicits heterochronic phenotypes in Caenorhabditis elegans
por: Hurschler, Benjamin A., et al.
Publicado: (2011)

The Caenorhabditis elegans GW182 protein AIN-1 interacts with PAB-1 and subunits of the PAN2-PAN3 and CCR4-NOT deadenylase complexes
por: Kuzuoğlu-Öztürk, Duygu, et al.
Publicado: (2012)

Insights into the structure and RNA-binding specificity of Caenorhabditis elegans Dicer-related helicase 3 (DRH-3)
por: Li, Kuohan, et al.
Publicado: (2021)

Large-scale prediction of long non-coding RNA functions in a coding–non-coding gene co-expression network
por: Liao, Qi, et al.
Publicado: (2011)

NONCODE v2.0: decoding the non-coding
por: He, Shunmin, et al.
Publicado: (2008)

Distinct MicroRNA Subcellular Size and Expression Patterns in Human Cancer Cells
por: Chen, Beibei, et al.
Publicado: (2012)

Cryo-EM structures of the late-stage assembly intermediates of the bacterial 50S ribosomal subunit
por: Li, Ningning, et al.
Publicado: (2013)

The HIV-2 Rev-response element: determining secondary structure and defining folding intermediates
por: Lusvarghi, Sabrina, et al.
Publicado: (2013)

The novel long non-coding RNA CRG regulates Drosophila locomotor behavior
por: Li, Meixia, et al.
Publicado: (2012)

HIV-1 DIS stem loop forms an obligatory bent kissing intermediate in the dimerization pathway
por: Mundigala, Hansini, et al.
Publicado: (2014)

The slicing activity of miRNA-specific Argonautes is essential for the miRNA pathway in C. elegans
por: Bouasker, Samir, et al.
Publicado: (2012)

piRBase: a web resource assisting piRNA functional study
por: Zhang, Peng, et al.
Publicado: (2014)

Analysis of C. elegans intestinal gene expression and polyadenylation by fluorescence-activated nuclei sorting and 3′-end-seq
por: Haenni, Simon, et al.
Publicado: (2012)

Poly(A)-binding proteins are required for microRNA-mediated silencing and to promote target deadenylation in C. elegans
por: Flamand, Mathieu N., et al.
Publicado: (2016)

Binding properties of YjeQ (RsgA), RbfA, RimM and Era to assembly intermediates of the 30S subunit
por: Thurlow, Brett, et al.
Publicado: (2016)

Solution structure of a let-7 miRNA:lin-41 mRNA complex from C. elegans
por: Cevec, Mirko, et al.
Publicado: (2008)

Cannot write session to /tmp/vufind_sessions/sess_ut29of69tk7mtcr12idb9mat4d