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Cell imaging beyond the diffraction limit using sparse deconvolution spatial light interference microscopy
We present an imaging method, dSLIM, that combines a novel deconvolution algorithm with spatial light interference microscopy (SLIM), to achieve 2.3x resolution enhancement with respect to the diffraction limit. By exploiting the sparsity of the phase images, which is prominent in many biological im...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Optical Society of America
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3130569/ https://www.ncbi.nlm.nih.gov/pubmed/21750760 http://dx.doi.org/10.1364/BOE.2.001815 |
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author | Babacan, S. Derin Wang, Zhuo Do, Minh Popescu, Gabriel |
author_facet | Babacan, S. Derin Wang, Zhuo Do, Minh Popescu, Gabriel |
author_sort | Babacan, S. Derin |
collection | PubMed |
description | We present an imaging method, dSLIM, that combines a novel deconvolution algorithm with spatial light interference microscopy (SLIM), to achieve 2.3x resolution enhancement with respect to the diffraction limit. By exploiting the sparsity of the phase images, which is prominent in many biological imaging applications, and modeling of the image formation via complex fields, the very fine structures can be recovered which were blurred by the optics. With experiments on SLIM images, we demonstrate that significant improvements in spatial resolution can be obtained by the proposed approach. Moreover, the resolution improvement leads to higher accuracy in monitoring dynamic activity over time. Experiments with primary brain cells, i.e. neurons and glial cells, reveal new subdiffraction structures and motions. This new information can be used for studying vesicle transport in neurons, which may shed light on dynamic cell functioning. Finally, the method is flexible to incorporate a wide range of image models for different applications and can be utilized for all imaging modalities acquiring complex field images. |
format | Online Article Text |
id | pubmed-3130569 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Optical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-31305692011-07-12 Cell imaging beyond the diffraction limit using sparse deconvolution spatial light interference microscopy Babacan, S. Derin Wang, Zhuo Do, Minh Popescu, Gabriel Biomed Opt Express Microscopy We present an imaging method, dSLIM, that combines a novel deconvolution algorithm with spatial light interference microscopy (SLIM), to achieve 2.3x resolution enhancement with respect to the diffraction limit. By exploiting the sparsity of the phase images, which is prominent in many biological imaging applications, and modeling of the image formation via complex fields, the very fine structures can be recovered which were blurred by the optics. With experiments on SLIM images, we demonstrate that significant improvements in spatial resolution can be obtained by the proposed approach. Moreover, the resolution improvement leads to higher accuracy in monitoring dynamic activity over time. Experiments with primary brain cells, i.e. neurons and glial cells, reveal new subdiffraction structures and motions. This new information can be used for studying vesicle transport in neurons, which may shed light on dynamic cell functioning. Finally, the method is flexible to incorporate a wide range of image models for different applications and can be utilized for all imaging modalities acquiring complex field images. Optical Society of America 2011-06-02 /pmc/articles/PMC3130569/ /pubmed/21750760 http://dx.doi.org/10.1364/BOE.2.001815 Text en ©2011 Optical Society of America http://creativecommons.org/licenses/by-nc-nd/3.0 This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-No Derivative Works 3.0 Unported License, which permits download and redistribution, provided that the original work is properly cited. This license restricts the article from being modified or used commercially. |
spellingShingle | Microscopy Babacan, S. Derin Wang, Zhuo Do, Minh Popescu, Gabriel Cell imaging beyond the diffraction limit using sparse deconvolution spatial light interference microscopy |
title | Cell imaging beyond the diffraction limit using sparse deconvolution spatial light interference microscopy |
title_full | Cell imaging beyond the diffraction limit using sparse deconvolution spatial light interference microscopy |
title_fullStr | Cell imaging beyond the diffraction limit using sparse deconvolution spatial light interference microscopy |
title_full_unstemmed | Cell imaging beyond the diffraction limit using sparse deconvolution spatial light interference microscopy |
title_short | Cell imaging beyond the diffraction limit using sparse deconvolution spatial light interference microscopy |
title_sort | cell imaging beyond the diffraction limit using sparse deconvolution spatial light interference microscopy |
topic | Microscopy |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3130569/ https://www.ncbi.nlm.nih.gov/pubmed/21750760 http://dx.doi.org/10.1364/BOE.2.001815 |
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