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Pathway-Based Association Analyses Identified TRAIL Pathway for Osteoporotic Fractures
INTRODUCTION: Hip OF carries the highest morbidity and mortality. Previous studies revealed that individual genes/loci in the Tumor Necrosis Factor (TNF) -Related Apoptosis-Inducing Ligand (TRAIL) pathway were associated with bone metabolism. This study aims to verify the potential association betwe...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3132733/ https://www.ncbi.nlm.nih.gov/pubmed/21760914 http://dx.doi.org/10.1371/journal.pone.0021835 |
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author | Zhang, Yin-Ping Liu, Yao-Zhong Guo, Yan Liu, Xiao-Gang Xu, Xiang-Hong Guo, Yan-Fang Chen, Yuan Zhang, Feng Pan, Feng Zhu, Xue-Zhen Deng, Hong-Wen |
author_facet | Zhang, Yin-Ping Liu, Yao-Zhong Guo, Yan Liu, Xiao-Gang Xu, Xiang-Hong Guo, Yan-Fang Chen, Yuan Zhang, Feng Pan, Feng Zhu, Xue-Zhen Deng, Hong-Wen |
author_sort | Zhang, Yin-Ping |
collection | PubMed |
description | INTRODUCTION: Hip OF carries the highest morbidity and mortality. Previous studies revealed that individual genes/loci in the Tumor Necrosis Factor (TNF) -Related Apoptosis-Inducing Ligand (TRAIL) pathway were associated with bone metabolism. This study aims to verify the potential association between hip OF and TRAIL pathway. METHODS: Using genome-wide genotype data from Affymetrix 500 K SNP arrays, we performed novel pathway-based association analyses for hip OF in 700 elderly Chinese Han subjects (350 with hip OF and 350 healthy matched controls). RESULTS: The TRAIL pathway achieved a significant p value (p = 0.01) for association with hip OF. Among the 38 genes in the TRAIL pathway, seven genes achieved nominally significant association with hip OF (p<0.05); the TNFSF10 (TRAIL) gene obtained the most significant p value (p = 1.70×10(−4)). SNPs (rs719126, rs6533015, rs9594738, rs1805034, rs11160706) from five genes (CFLAR, NFKB1, TNFSF11, TNFRSF11A, TRAF3) of the pathway had minor alleles that appear to be protective to hip OF. SNPs (rs6445063 and rs4259415) from two genes (TNFSF10 and TNFRSF10B) of the pathway had minor alleles (A) that are associated with an increased risk of hip OF, with the ORs (odds ratios) of 16.51 (95%CI:3.83–71.24) and 1.37 (95%CI:1.08–1.74), respectively. CONCLUSIONS: Our study supports the potential role of the TRAIL pathway in the pathogenesis of hip OF in Chinese Han population. Further functional study of this pathway will be pursued to determine the mechanism by which it confers risk to hip OF. |
format | Online Article Text |
id | pubmed-3132733 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-31327332011-07-14 Pathway-Based Association Analyses Identified TRAIL Pathway for Osteoporotic Fractures Zhang, Yin-Ping Liu, Yao-Zhong Guo, Yan Liu, Xiao-Gang Xu, Xiang-Hong Guo, Yan-Fang Chen, Yuan Zhang, Feng Pan, Feng Zhu, Xue-Zhen Deng, Hong-Wen PLoS One Research Article INTRODUCTION: Hip OF carries the highest morbidity and mortality. Previous studies revealed that individual genes/loci in the Tumor Necrosis Factor (TNF) -Related Apoptosis-Inducing Ligand (TRAIL) pathway were associated with bone metabolism. This study aims to verify the potential association between hip OF and TRAIL pathway. METHODS: Using genome-wide genotype data from Affymetrix 500 K SNP arrays, we performed novel pathway-based association analyses for hip OF in 700 elderly Chinese Han subjects (350 with hip OF and 350 healthy matched controls). RESULTS: The TRAIL pathway achieved a significant p value (p = 0.01) for association with hip OF. Among the 38 genes in the TRAIL pathway, seven genes achieved nominally significant association with hip OF (p<0.05); the TNFSF10 (TRAIL) gene obtained the most significant p value (p = 1.70×10(−4)). SNPs (rs719126, rs6533015, rs9594738, rs1805034, rs11160706) from five genes (CFLAR, NFKB1, TNFSF11, TNFRSF11A, TRAF3) of the pathway had minor alleles that appear to be protective to hip OF. SNPs (rs6445063 and rs4259415) from two genes (TNFSF10 and TNFRSF10B) of the pathway had minor alleles (A) that are associated with an increased risk of hip OF, with the ORs (odds ratios) of 16.51 (95%CI:3.83–71.24) and 1.37 (95%CI:1.08–1.74), respectively. CONCLUSIONS: Our study supports the potential role of the TRAIL pathway in the pathogenesis of hip OF in Chinese Han population. Further functional study of this pathway will be pursued to determine the mechanism by which it confers risk to hip OF. Public Library of Science 2011-07-08 /pmc/articles/PMC3132733/ /pubmed/21760914 http://dx.doi.org/10.1371/journal.pone.0021835 Text en Zhang et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Zhang, Yin-Ping Liu, Yao-Zhong Guo, Yan Liu, Xiao-Gang Xu, Xiang-Hong Guo, Yan-Fang Chen, Yuan Zhang, Feng Pan, Feng Zhu, Xue-Zhen Deng, Hong-Wen Pathway-Based Association Analyses Identified TRAIL Pathway for Osteoporotic Fractures |
title | Pathway-Based Association Analyses Identified TRAIL Pathway for Osteoporotic Fractures |
title_full | Pathway-Based Association Analyses Identified TRAIL Pathway for Osteoporotic Fractures |
title_fullStr | Pathway-Based Association Analyses Identified TRAIL Pathway for Osteoporotic Fractures |
title_full_unstemmed | Pathway-Based Association Analyses Identified TRAIL Pathway for Osteoporotic Fractures |
title_short | Pathway-Based Association Analyses Identified TRAIL Pathway for Osteoporotic Fractures |
title_sort | pathway-based association analyses identified trail pathway for osteoporotic fractures |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3132733/ https://www.ncbi.nlm.nih.gov/pubmed/21760914 http://dx.doi.org/10.1371/journal.pone.0021835 |
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