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Copy Number Variation in CNP267 Region May Be Associated with Hip Bone Size

Osteoporotic hip fracture (HF) is a serious global public health problem associated with high morbidity and mortality. Hip bone size (BS) has been identified as one of key measurable risk factors for HF, independent of bone mineral density (BMD). Hip BS is highly genetically determined, but genetic...

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Autores principales: Liu, Shan-Lin, Lei, Shu-Feng, Yang, Fang, Li, Xi, Liu, Rong, Nie, Shan, Liu, Xiao-Gang, Yang, Tie-Lin, Guo, Yan, Deng, Fei-Yan, Tian, Qing, Li, Jian, Liu, Yao-Zhong, Liu, Yong-Jun, Shen, Hui, Deng, Hong-Wen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3137628/
https://www.ncbi.nlm.nih.gov/pubmed/21789208
http://dx.doi.org/10.1371/journal.pone.0022035
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author Liu, Shan-Lin
Lei, Shu-Feng
Yang, Fang
Li, Xi
Liu, Rong
Nie, Shan
Liu, Xiao-Gang
Yang, Tie-Lin
Guo, Yan
Deng, Fei-Yan
Tian, Qing
Li, Jian
Liu, Yao-Zhong
Liu, Yong-Jun
Shen, Hui
Deng, Hong-Wen
author_facet Liu, Shan-Lin
Lei, Shu-Feng
Yang, Fang
Li, Xi
Liu, Rong
Nie, Shan
Liu, Xiao-Gang
Yang, Tie-Lin
Guo, Yan
Deng, Fei-Yan
Tian, Qing
Li, Jian
Liu, Yao-Zhong
Liu, Yong-Jun
Shen, Hui
Deng, Hong-Wen
author_sort Liu, Shan-Lin
collection PubMed
description Osteoporotic hip fracture (HF) is a serious global public health problem associated with high morbidity and mortality. Hip bone size (BS) has been identified as one of key measurable risk factors for HF, independent of bone mineral density (BMD). Hip BS is highly genetically determined, but genetic factors underlying BS variation are still poorly defined. Here, we performed an initial genome-wide copy number variation (CNV) association analysis for hip BS in 1,627 Chinese Han subjects using Affymetrix GeneChip Human Mapping SNP 6.0 Array and a follow-up replicate study in 2,286 unrelated US Caucasians sample. We found that a copy number polymorphism (CNP267) located at chromosome 2q12.2 was significantly associated with hip BS in both initial Chinese and replicate Caucasian samples with p values of 4.73E-03 and 5.66E-03, respectively. An important candidate gene, four and a half LIM domains 2 (FHL2), was detected at the downstream of CNP267, which plays important roles in bone metabolism by binding to several bone formation regulator, such as insulin-like growth factor-binding protein 5 (IGFBP-5) and androgen receptor (AR). Our findings suggest that CNP267 region may be associated with hip BS which might influence the FHL2 gene downstream.
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spelling pubmed-31376282011-07-25 Copy Number Variation in CNP267 Region May Be Associated with Hip Bone Size Liu, Shan-Lin Lei, Shu-Feng Yang, Fang Li, Xi Liu, Rong Nie, Shan Liu, Xiao-Gang Yang, Tie-Lin Guo, Yan Deng, Fei-Yan Tian, Qing Li, Jian Liu, Yao-Zhong Liu, Yong-Jun Shen, Hui Deng, Hong-Wen PLoS One Research Article Osteoporotic hip fracture (HF) is a serious global public health problem associated with high morbidity and mortality. Hip bone size (BS) has been identified as one of key measurable risk factors for HF, independent of bone mineral density (BMD). Hip BS is highly genetically determined, but genetic factors underlying BS variation are still poorly defined. Here, we performed an initial genome-wide copy number variation (CNV) association analysis for hip BS in 1,627 Chinese Han subjects using Affymetrix GeneChip Human Mapping SNP 6.0 Array and a follow-up replicate study in 2,286 unrelated US Caucasians sample. We found that a copy number polymorphism (CNP267) located at chromosome 2q12.2 was significantly associated with hip BS in both initial Chinese and replicate Caucasian samples with p values of 4.73E-03 and 5.66E-03, respectively. An important candidate gene, four and a half LIM domains 2 (FHL2), was detected at the downstream of CNP267, which plays important roles in bone metabolism by binding to several bone formation regulator, such as insulin-like growth factor-binding protein 5 (IGFBP-5) and androgen receptor (AR). Our findings suggest that CNP267 region may be associated with hip BS which might influence the FHL2 gene downstream. Public Library of Science 2011-07-15 /pmc/articles/PMC3137628/ /pubmed/21789208 http://dx.doi.org/10.1371/journal.pone.0022035 Text en Liu et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Liu, Shan-Lin
Lei, Shu-Feng
Yang, Fang
Li, Xi
Liu, Rong
Nie, Shan
Liu, Xiao-Gang
Yang, Tie-Lin
Guo, Yan
Deng, Fei-Yan
Tian, Qing
Li, Jian
Liu, Yao-Zhong
Liu, Yong-Jun
Shen, Hui
Deng, Hong-Wen
Copy Number Variation in CNP267 Region May Be Associated with Hip Bone Size
title Copy Number Variation in CNP267 Region May Be Associated with Hip Bone Size
title_full Copy Number Variation in CNP267 Region May Be Associated with Hip Bone Size
title_fullStr Copy Number Variation in CNP267 Region May Be Associated with Hip Bone Size
title_full_unstemmed Copy Number Variation in CNP267 Region May Be Associated with Hip Bone Size
title_short Copy Number Variation in CNP267 Region May Be Associated with Hip Bone Size
title_sort copy number variation in cnp267 region may be associated with hip bone size
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3137628/
https://www.ncbi.nlm.nih.gov/pubmed/21789208
http://dx.doi.org/10.1371/journal.pone.0022035
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