Cargando…
Copy Number Variation in CNP267 Region May Be Associated with Hip Bone Size
Osteoporotic hip fracture (HF) is a serious global public health problem associated with high morbidity and mortality. Hip bone size (BS) has been identified as one of key measurable risk factors for HF, independent of bone mineral density (BMD). Hip BS is highly genetically determined, but genetic...
Autores principales: | , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2011
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3137628/ https://www.ncbi.nlm.nih.gov/pubmed/21789208 http://dx.doi.org/10.1371/journal.pone.0022035 |
_version_ | 1782208307026460672 |
---|---|
author | Liu, Shan-Lin Lei, Shu-Feng Yang, Fang Li, Xi Liu, Rong Nie, Shan Liu, Xiao-Gang Yang, Tie-Lin Guo, Yan Deng, Fei-Yan Tian, Qing Li, Jian Liu, Yao-Zhong Liu, Yong-Jun Shen, Hui Deng, Hong-Wen |
author_facet | Liu, Shan-Lin Lei, Shu-Feng Yang, Fang Li, Xi Liu, Rong Nie, Shan Liu, Xiao-Gang Yang, Tie-Lin Guo, Yan Deng, Fei-Yan Tian, Qing Li, Jian Liu, Yao-Zhong Liu, Yong-Jun Shen, Hui Deng, Hong-Wen |
author_sort | Liu, Shan-Lin |
collection | PubMed |
description | Osteoporotic hip fracture (HF) is a serious global public health problem associated with high morbidity and mortality. Hip bone size (BS) has been identified as one of key measurable risk factors for HF, independent of bone mineral density (BMD). Hip BS is highly genetically determined, but genetic factors underlying BS variation are still poorly defined. Here, we performed an initial genome-wide copy number variation (CNV) association analysis for hip BS in 1,627 Chinese Han subjects using Affymetrix GeneChip Human Mapping SNP 6.0 Array and a follow-up replicate study in 2,286 unrelated US Caucasians sample. We found that a copy number polymorphism (CNP267) located at chromosome 2q12.2 was significantly associated with hip BS in both initial Chinese and replicate Caucasian samples with p values of 4.73E-03 and 5.66E-03, respectively. An important candidate gene, four and a half LIM domains 2 (FHL2), was detected at the downstream of CNP267, which plays important roles in bone metabolism by binding to several bone formation regulator, such as insulin-like growth factor-binding protein 5 (IGFBP-5) and androgen receptor (AR). Our findings suggest that CNP267 region may be associated with hip BS which might influence the FHL2 gene downstream. |
format | Online Article Text |
id | pubmed-3137628 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-31376282011-07-25 Copy Number Variation in CNP267 Region May Be Associated with Hip Bone Size Liu, Shan-Lin Lei, Shu-Feng Yang, Fang Li, Xi Liu, Rong Nie, Shan Liu, Xiao-Gang Yang, Tie-Lin Guo, Yan Deng, Fei-Yan Tian, Qing Li, Jian Liu, Yao-Zhong Liu, Yong-Jun Shen, Hui Deng, Hong-Wen PLoS One Research Article Osteoporotic hip fracture (HF) is a serious global public health problem associated with high morbidity and mortality. Hip bone size (BS) has been identified as one of key measurable risk factors for HF, independent of bone mineral density (BMD). Hip BS is highly genetically determined, but genetic factors underlying BS variation are still poorly defined. Here, we performed an initial genome-wide copy number variation (CNV) association analysis for hip BS in 1,627 Chinese Han subjects using Affymetrix GeneChip Human Mapping SNP 6.0 Array and a follow-up replicate study in 2,286 unrelated US Caucasians sample. We found that a copy number polymorphism (CNP267) located at chromosome 2q12.2 was significantly associated with hip BS in both initial Chinese and replicate Caucasian samples with p values of 4.73E-03 and 5.66E-03, respectively. An important candidate gene, four and a half LIM domains 2 (FHL2), was detected at the downstream of CNP267, which plays important roles in bone metabolism by binding to several bone formation regulator, such as insulin-like growth factor-binding protein 5 (IGFBP-5) and androgen receptor (AR). Our findings suggest that CNP267 region may be associated with hip BS which might influence the FHL2 gene downstream. Public Library of Science 2011-07-15 /pmc/articles/PMC3137628/ /pubmed/21789208 http://dx.doi.org/10.1371/journal.pone.0022035 Text en Liu et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Liu, Shan-Lin Lei, Shu-Feng Yang, Fang Li, Xi Liu, Rong Nie, Shan Liu, Xiao-Gang Yang, Tie-Lin Guo, Yan Deng, Fei-Yan Tian, Qing Li, Jian Liu, Yao-Zhong Liu, Yong-Jun Shen, Hui Deng, Hong-Wen Copy Number Variation in CNP267 Region May Be Associated with Hip Bone Size |
title | Copy Number Variation in CNP267 Region May Be Associated with Hip Bone Size |
title_full | Copy Number Variation in CNP267 Region May Be Associated with Hip Bone Size |
title_fullStr | Copy Number Variation in CNP267 Region May Be Associated with Hip Bone Size |
title_full_unstemmed | Copy Number Variation in CNP267 Region May Be Associated with Hip Bone Size |
title_short | Copy Number Variation in CNP267 Region May Be Associated with Hip Bone Size |
title_sort | copy number variation in cnp267 region may be associated with hip bone size |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3137628/ https://www.ncbi.nlm.nih.gov/pubmed/21789208 http://dx.doi.org/10.1371/journal.pone.0022035 |
work_keys_str_mv | AT liushanlin copynumbervariationincnp267regionmaybeassociatedwithhipbonesize AT leishufeng copynumbervariationincnp267regionmaybeassociatedwithhipbonesize AT yangfang copynumbervariationincnp267regionmaybeassociatedwithhipbonesize AT lixi copynumbervariationincnp267regionmaybeassociatedwithhipbonesize AT liurong copynumbervariationincnp267regionmaybeassociatedwithhipbonesize AT nieshan copynumbervariationincnp267regionmaybeassociatedwithhipbonesize AT liuxiaogang copynumbervariationincnp267regionmaybeassociatedwithhipbonesize AT yangtielin copynumbervariationincnp267regionmaybeassociatedwithhipbonesize AT guoyan copynumbervariationincnp267regionmaybeassociatedwithhipbonesize AT dengfeiyan copynumbervariationincnp267regionmaybeassociatedwithhipbonesize AT tianqing copynumbervariationincnp267regionmaybeassociatedwithhipbonesize AT lijian copynumbervariationincnp267regionmaybeassociatedwithhipbonesize AT liuyaozhong copynumbervariationincnp267regionmaybeassociatedwithhipbonesize AT liuyongjun copynumbervariationincnp267regionmaybeassociatedwithhipbonesize AT shenhui copynumbervariationincnp267regionmaybeassociatedwithhipbonesize AT denghongwen copynumbervariationincnp267regionmaybeassociatedwithhipbonesize |