Cargando…

GWAS for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease

BACKGROUND: Epidemiologic evidence suggests a heritable component to risk for sudden cardiac arrest independent of risk for myocardial infarction. Recent candidate gene association studies for community sudden cardiac arrests have focused on a limited number of biological pathways and yielded confli...

Descripción completa

Detalles Bibliográficos
Autores principales: Aouizerat, Bradley E, Vittinghoff, Eric, Musone, Stacy L, Pawlikowska, Ludmila, Kwok, Pui-Yan, Olgin, Jeffrey E, Tseng, Zian H
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3141757/
https://www.ncbi.nlm.nih.gov/pubmed/21658281
http://dx.doi.org/10.1186/1471-2261-11-29
_version_ 1782208749707984896
author Aouizerat, Bradley E
Vittinghoff, Eric
Musone, Stacy L
Pawlikowska, Ludmila
Kwok, Pui-Yan
Olgin, Jeffrey E
Tseng, Zian H
author_facet Aouizerat, Bradley E
Vittinghoff, Eric
Musone, Stacy L
Pawlikowska, Ludmila
Kwok, Pui-Yan
Olgin, Jeffrey E
Tseng, Zian H
author_sort Aouizerat, Bradley E
collection PubMed
description BACKGROUND: Epidemiologic evidence suggests a heritable component to risk for sudden cardiac arrest independent of risk for myocardial infarction. Recent candidate gene association studies for community sudden cardiac arrests have focused on a limited number of biological pathways and yielded conflicting results. We sought to identify novel gene associations for sudden cardiac arrest in patients with coronary artery disease by performing a genome-wide association study. METHODS: Tagging SNPs (n = 338,328) spanning the genome were typed in a case-control study comparing 89 patients with coronary artery disease and sudden cardiac arrest due to ventricular tachycardia or ventricular fibrillation to 520 healthy controls. RESULTS: Fourteen SNPs including 7 SNPs among 7 genes (ACYP2, AP1G2, ESR1, DGES2, GRIA1, KCTD1, ZNF385B) were associated with sudden cardiac arrest (all p < 1.30 × 10(-7)), following Bonferroni correction and adjustment for population substructure, age, and sex; genetic variation in ESR1 (p = 2.62 × 10(-8); Odds Ratio [OR] = 1.43, 95% confidence interval [CI]:1.277, 1.596) has previously been established as a risk factor for cardiovascular disease. In tandem, the role of 9 genes for monogenic long QT syndrome (LQT1-9) was assessed, yielding evidence of association with CACNA1C (LQT8; p = 3.09 × 10(-4); OR = 1.18, 95% CI:1.079, 1.290). We also assessed 4 recently published gene associations for sudden cardiac arrest, validating NOS1AP (p = 4.50 × 10(-2), OR = 1.15, 95% CI:1.003, 1.326), CSMD2 (p = 6.6 × 10(-3), OR = 2.27, 95% CI:1.681, 2.859), and AGTR1 (p = 3.00 × 10(-3), OR = 1.13, 95% CI:1.042, 1.215). CONCLUSION: We demonstrate 11 gene associations for sudden cardiac arrest due to ventricular tachycardia/ventricular fibrillation in patients with coronary artery disease. Validation studies in independent cohorts and functional studies are required to confirm these associations.
format Online
Article
Text
id pubmed-3141757
institution National Center for Biotechnology Information
language English
publishDate 2011
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-31417572011-07-23 GWAS for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease Aouizerat, Bradley E Vittinghoff, Eric Musone, Stacy L Pawlikowska, Ludmila Kwok, Pui-Yan Olgin, Jeffrey E Tseng, Zian H BMC Cardiovasc Disord Research Article BACKGROUND: Epidemiologic evidence suggests a heritable component to risk for sudden cardiac arrest independent of risk for myocardial infarction. Recent candidate gene association studies for community sudden cardiac arrests have focused on a limited number of biological pathways and yielded conflicting results. We sought to identify novel gene associations for sudden cardiac arrest in patients with coronary artery disease by performing a genome-wide association study. METHODS: Tagging SNPs (n = 338,328) spanning the genome were typed in a case-control study comparing 89 patients with coronary artery disease and sudden cardiac arrest due to ventricular tachycardia or ventricular fibrillation to 520 healthy controls. RESULTS: Fourteen SNPs including 7 SNPs among 7 genes (ACYP2, AP1G2, ESR1, DGES2, GRIA1, KCTD1, ZNF385B) were associated with sudden cardiac arrest (all p < 1.30 × 10(-7)), following Bonferroni correction and adjustment for population substructure, age, and sex; genetic variation in ESR1 (p = 2.62 × 10(-8); Odds Ratio [OR] = 1.43, 95% confidence interval [CI]:1.277, 1.596) has previously been established as a risk factor for cardiovascular disease. In tandem, the role of 9 genes for monogenic long QT syndrome (LQT1-9) was assessed, yielding evidence of association with CACNA1C (LQT8; p = 3.09 × 10(-4); OR = 1.18, 95% CI:1.079, 1.290). We also assessed 4 recently published gene associations for sudden cardiac arrest, validating NOS1AP (p = 4.50 × 10(-2), OR = 1.15, 95% CI:1.003, 1.326), CSMD2 (p = 6.6 × 10(-3), OR = 2.27, 95% CI:1.681, 2.859), and AGTR1 (p = 3.00 × 10(-3), OR = 1.13, 95% CI:1.042, 1.215). CONCLUSION: We demonstrate 11 gene associations for sudden cardiac arrest due to ventricular tachycardia/ventricular fibrillation in patients with coronary artery disease. Validation studies in independent cohorts and functional studies are required to confirm these associations. BioMed Central 2011-06-10 /pmc/articles/PMC3141757/ /pubmed/21658281 http://dx.doi.org/10.1186/1471-2261-11-29 Text en Copyright ©2011 Aouizerat et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Aouizerat, Bradley E
Vittinghoff, Eric
Musone, Stacy L
Pawlikowska, Ludmila
Kwok, Pui-Yan
Olgin, Jeffrey E
Tseng, Zian H
GWAS for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease
title GWAS for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease
title_full GWAS for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease
title_fullStr GWAS for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease
title_full_unstemmed GWAS for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease
title_short GWAS for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease
title_sort gwas for discovery and replication of genetic loci associated with sudden cardiac arrest in patients with coronary artery disease
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3141757/
https://www.ncbi.nlm.nih.gov/pubmed/21658281
http://dx.doi.org/10.1186/1471-2261-11-29
work_keys_str_mv AT aouizeratbradleye gwasfordiscoveryandreplicationofgeneticlociassociatedwithsuddencardiacarrestinpatientswithcoronaryarterydisease
AT vittinghofferic gwasfordiscoveryandreplicationofgeneticlociassociatedwithsuddencardiacarrestinpatientswithcoronaryarterydisease
AT musonestacyl gwasfordiscoveryandreplicationofgeneticlociassociatedwithsuddencardiacarrestinpatientswithcoronaryarterydisease
AT pawlikowskaludmila gwasfordiscoveryandreplicationofgeneticlociassociatedwithsuddencardiacarrestinpatientswithcoronaryarterydisease
AT kwokpuiyan gwasfordiscoveryandreplicationofgeneticlociassociatedwithsuddencardiacarrestinpatientswithcoronaryarterydisease
AT olginjeffreye gwasfordiscoveryandreplicationofgeneticlociassociatedwithsuddencardiacarrestinpatientswithcoronaryarterydisease
AT tsengzianh gwasfordiscoveryandreplicationofgeneticlociassociatedwithsuddencardiacarrestinpatientswithcoronaryarterydisease