Cargando…

Detection of Fused Genes in Eukaryotic Genomes using Gene deFuser: Analysis of the Tetrahymena thermophila genome

BACKGROUND: Fused genes are important sources of data for studies of evolution and protein function. To date no service has been made available online to aid in the large-scale identification of fused genes in sequenced genomes. We have developed a program, Gene deFuser, that analyzes uploaded prote...

Descripción completa

Detalles Bibliográficos
Autores principales:	Salim, Hannah MW, Koire, Amanda M, Stover, Nicholas A, Cavalcanti, Andre RO
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2011
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3143110/ https://www.ncbi.nlm.nih.gov/pubmed/21745395 http://dx.doi.org/10.1186/1471-2105-12-279

Ejemplares similares

Macronuclear Genome Sequence of the Ciliate Tetrahymena thermophila, a Model Eukaryote
por: Eisen, Jonathan A, et al.
Publicado: (2006)

Tetrahymena Genome Database (TGD): a new genomic resource for Tetrahymena thermophila research
por: Stover, Nicholas A., et al.
Publicado: (2006)

Temperature affects the repeatability of evolution in the microbial eukaryote Tetrahymena thermophila
por: Tarkington, Jason, et al.
Publicado: (2021)

Gene Network Landscape of the Ciliate Tetrahymena thermophila
por: Xiong, Jie, et al.
Publicado: (2011)

Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome
por: Hamilton, Eileen P, et al.
Publicado: (2016)

Genome-wide identification and characterization of cytochrome P450 monooxygenase genes in the ciliate Tetrahymena thermophila
por: Fu, Chengjie, et al.
Publicado: (2009)

Genome-Wide Prediction of the Polymorphic Ser Gene Family in Tetrahymena thermophila Based on Motif Analysis
por: Ponsuwanna, Patrath, et al.
Publicado: (2014)

Genome-Scale Analysis of Programmed DNA Elimination Sites in Tetrahymena thermophila
por: Fass, Joseph N., et al.
Publicado: (2011)

Multifunctional Acyltransferases from Tetrahymena thermophila
por: Biester, Eva-Maria, et al.
Publicado: (2011)

Microarray Analyses of Gene Expression during the Tetrahymena thermophila Life Cycle
por: Miao, Wei, et al.
Publicado: (2009)

deFuse: An Algorithm for Gene Fusion Discovery in Tumor RNA-Seq Data
por: McPherson, Andrew, et al.
Publicado: (2011)

Programmed Minichromosome Elimination as a Mechanism for Somatic Genome Reduction in Tetrahymena thermophila
por: Lin, Chih-Yi Gabriela, et al.
Publicado: (2016)

Low Base-Substitution Mutation Rate in the Germline Genome of the Ciliate Tetrahymena thermophila
por: Long, Hongan, et al.
Publicado: (2016)

Identification and Characterization of Base-Substitution Mutations in the Macronuclear Genome of the Ciliate Tetrahymena thermophila
por: Wang, Guangying, et al.
Publicado: (2020)

Secretion of functional human enzymes by Tetrahymena thermophila
por: Weide, Thomas, et al.
Publicado: (2006)

Phenotypic responses to temperature in the ciliate Tetrahymena thermophila
por: Weber de Melo, Vanessa, et al.
Publicado: (2020)

Drivers of Mating Type Composition in Tetrahymena thermophila
por: Wang, Guangying, et al.
Publicado: (2020)

1+1 = 3: A Fusion of 2 Enzymes in the Methionine Salvage Pathway of Tetrahymena thermophila Creates a Trifunctional Enzyme That Catalyzes 3 Steps in the Pathway
por: Salim, Hannah M. W., et al.
Publicado: (2009)

Netrin-1 Peptide Is a Chemorepellent in Tetrahymena thermophila
por: Kuruvilla, Heather, et al.
Publicado: (2016)

Developmental Regulation of the Tetrahymena thermophila Origin Recognition Complex
por: Lee, Po-Hsuen, et al.
Publicado: (2015)

Transcriptome analysis of Tetrahymena thermophila response to exposure with dihydroartemisinin
por: Pan, Houjun, et al.
Publicado: (2023)

Case Study of the Response of N(6)-Methyladenine DNA Modification to Environmental Stressors in the Unicellular Eukaryote Tetrahymena thermophila
por: Sheng, Yalan, et al.
Publicado: (2021)

Biochemical and molecular characterisation of Tetrahymena thermophila extracellular cysteine proteases
por: Herrmann, Lutz, et al.
Publicado: (2006)

Acetylation of lysine 40 in alpha-tubulin is not essential in Tetrahymena thermophila
Publicado: (1995)

Highly Divergent Mitochondrial ATP Synthase Complexes in Tetrahymena thermophila
por: Balabaskaran Nina, Praveen, et al.
Publicado: (2010)

A sequence-dependent exonuclease activity from Tetrahymena thermophila
por: Tom, Hui-I Kao, et al.
Publicado: (2010)

Entry and Killing of Tetrahymena thermophila by Bacterially Produced Shiga Toxin
por: Stolfa, Gino, et al.
Publicado: (2012)

The key role of CYC2 during meiosis in Tetrahymena thermophila
por: Xu, Qianlan, et al.
Publicado: (2016)

Functional Proteomics of Nuclear Proteins in Tetrahymena thermophila: A Review
por: Saettone, Alejandro, et al.
Publicado: (2019)

Exploring the Histone Acetylation Cycle in the Protozoan Model Tetrahymena thermophila
por: Wahab, Suzanne, et al.
Publicado: (2020)

Functional proteomics protocol for the identification of interaction partners in Tetrahymena thermophila
por: Nabeel-Shah, Syed, et al.
Publicado: (2021)

Structures of Tetrahymena thermophila respiratory megacomplexes on the tubular mitochondrial cristae
por: Han, Fangzhu, et al.
Publicado: (2023)

Selecting One of Several Mating Types through Gene Segment Joining and Deletion in Tetrahymena thermophila
por: Cervantes, Marcella D., et al.
Publicado: (2013)

Phagocytic and pinocytic uptake of cholesterol in Tetrahymena thermophila impact differently on gene regulation for sterol homeostasis
por: Hernández, Josefina, et al.
Publicado: (2021)

Whole Genome Sequencing Identifies a Novel Factor Required for Secretory Granule Maturation in Tetrahymena thermophila
por: Kontur, Cassandra, et al.
Publicado: (2016)

Setting boundaries for genome-wide heterochromatic DNA deletions through flanking inverted repeats in Tetrahymena thermophila
por: Lin, Chih-Yi Gabriela, et al.
Publicado: (2019)

Defusing inflammasomes
por: Sandstrom, Andrew, et al.
Publicado: (2018)

Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
por: Coyne, Robert S, et al.
Publicado: (2008)

Correction: Selecting One of Several Mating Types through Gene Segment Joining and Deletion in Tetrahymena thermophila
por: Cervantes, Marcella D., et al.
Publicado: (2015)

AP-1 (bZIP) Transcription Factors as Potential Regulators of Metallothionein Gene Expression in Tetrahymena thermophila
por: de Francisco, Patricia, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_ur1mdp2k9bhbj26f1npouqjssi