Cargando…

Oral Microbiome Profiles: 16S rRNA Pyrosequencing and Microarray Assay Comparison

OBJECTIVES: The human oral microbiome is potentially related to diverse health conditions and high-throughput technology provides the possibility of surveying microbial community structure at high resolution. We compared two oral microbiome survey methods: broad-based microbiome identification by 16...

Descripción completa

Detalles Bibliográficos
Autores principales:	Ahn, Jiyoung, Yang, Liying, Paster, Bruce J., Ganly, Ian, Morris, Luc, Pei, Zhiheng, Hayes, Richard B.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2011
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3146496/ https://www.ncbi.nlm.nih.gov/pubmed/21829515 http://dx.doi.org/10.1371/journal.pone.0022788

Ejemplares similares

16S rRNA gene pyrosequencing of reference and clinical samples and investigation of the temperature stability of microbiome profiles
por: Hang, Jun, et al.
Publicado: (2014)

Sputum Microbiota in Tuberculosis as Revealed by 16S rRNA Pyrosequencing
por: Cheung, Man Kit, et al.
Publicado: (2013)

Improved Detection of Bifidobacteria with Optimised 16S rRNA-Gene Based Pyrosequencing
por: Sim, Kathleen, et al.
Publicado: (2012)

Comparison of bacterial culture and 16S rRNA community profiling by clonal analysis and pyrosequencing for the characterization of the dentine caries-associated microbiome
por: Schulze-Schweifing, Kathrin, et al.
Publicado: (2014)

Sex, Body Mass Index, and Dietary Fiber Intake Influence the Human Gut Microbiome
por: Dominianni, Christine, et al.
Publicado: (2015)

Oral Microbiome in Nonsmoker Patients with Oral Cavity Squamous Cell Carcinoma, Defined by Metagenomic Shotgun Sequencing
por: Ganly, Ian, et al.
Publicado: (2022)

Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers
por: Liu, Zongzhi, et al.
Publicado: (2008)

A Comparison of rpoB and 16S rRNA as Markers in Pyrosequencing Studies of Bacterial Diversity
por: Vos, Michiel, et al.
Publicado: (2012)

Characterization of the Fecal Microbial Communities of Duroc Pigs Using 16S rRNA Gene Pyrosequencing
por: Pajarillo, Edward Alain B., et al.
Publicado: (2015)

Species-level core oral bacteriome identified by 16S rRNA pyrosequencing in a healthy young Arab population
por: Al-hebshi, Nezar Noor, et al.
Publicado: (2016)

Up to Species-level Community Analysis of Human Gut Microbiota by 16S rRNA Amplicon Pyrosequencing
por: NAKAYAMA, Jiro, et al.
Publicado: (2013)

Bacterial Population Dynamics in a Laboratory Activated Sludge Reactor Monitored by Pyrosequencing of 16S rRNA
por: Satoh, Hiroyasu, et al.
Publicado: (2013)

Bacterial community composition in the gut content of Lampetra japonica revealed by 16S rRNA gene pyrosequencing
por: Zuo, Yu, et al.
Publicado: (2017)

Dataset of 16S rRNA and alkB genes in hydrocarbon polluted soils of Kuwait as revealed by Pyrosequencing
por: Al-Momin, Sabah, et al.
Publicado: (2022)

Correlation of Aggregatibacter actinomycetemcomitans Detection with Clinical/Immunoinflammatory Profile of Localized Aggressive Periodontitis Using a 16S rRNA Microarray Method: A Cross-Sectional Study
por: Gonçalves, Patricia F., et al.
Publicado: (2013)

16S rRNA Gene Pyrosequencing Reveals Bacterial Dysbiosis in the Duodenum of Dogs with Idiopathic Inflammatory Bowel Disease
por: Suchodolski, Jan S., et al.
Publicado: (2012)

Pyrosequencing of 16S rRNA gene amplicons to study the microbiota in the gastrointestinal tract of carp (Cyprinus carpio L.)
por: van Kessel, Maartje AHJ, et al.
Publicado: (2011)

Cataloguing the bacterial community of the Great Salt Plains, Oklahoma using 16S rRNA based metagenomics pyrosequencing
por: Gad, Ahmed H.
Publicado: (2017)

Pyrosequencing 16S rRNA genes of bacteria associated with wild tiger mosquito Aedes albopictus: a pilot study
por: Minard, Guillaume, et al.
Publicado: (2014)

Microbial Diversity in Hummock and Hollow Soils of Three Wetlands on the Qinghai-Tibetan Plateau Revealed by 16S rRNA Pyrosequencing
por: Deng, Yongcui, et al.
Publicado: (2014)

Bacterial Community Composition of South China Sea Sediments through Pyrosequencing-Based Analysis of 16S rRNA Genes
por: Zhu, Daochen, et al.
Publicado: (2013)

A Comprehensive Census of Microbial Diversity in Hot Springs of Tengchong, Yunnan Province China Using 16S rRNA Gene Pyrosequencing
por: Hou, Weiguo, et al.
Publicado: (2013)

Drinking alcohol is associated with variation in the human oral microbiome in a large study of American adults
por: Fan, Xiaozhou, et al.
Publicado: (2018)

Sample tracking in microbiome community profiling assays using synthetic 16S rRNA gene spike-in controls
por: Tourlousse, Dieter M., et al.
Publicado: (2018)

Taxonomic composition of the particle-attached and free-living bacterial assemblages in the Northwest Mediterranean Sea analyzed by pyrosequencing of the 16S rRNA
por: Crespo, Bibiana G, et al.
Publicado: (2013)

The Influence of DNA Extraction Procedure and Primer Set on the Bacterial Community Analysis by Pyrosequencing of Barcoded 16S rRNA Gene Amplicons
por: Starke, Ingo C., et al.
Publicado: (2014)

Diversity of Microbial Communities in Production and Injection Waters of Algerian Oilfields Revealed by 16S rRNA Gene Amplicon 454 Pyrosequencing
por: Lenchi, Nesrine, et al.
Publicado: (2013)

Correction: Bacterial Community Composition of South China Sea Sediments through Pyrosequencing-Based Analysis of 16S rRNA Genes
por: Zhu, Daochen, et al.
Publicado: (2013)

Effects of season and experimental warming on the bacterial community in a temperate mountain forest soil assessed by 16S rRNA gene pyrosequencing
por: Kuffner, Melanie, et al.
Publicado: (2012)

Bacterial Community Composition in the Gut Content and Ambient Sediment of Sea Cucumber Apostichopus japonicus Revealed by 16S rRNA Gene Pyrosequencing
por: Gao, Fei, et al.
Publicado: (2014)

Assessing bacterial diversity in a seawater-processing wastewater treatment plant by 454-pyrosequencing of the 16S rRNA and amoA genes
por: Sánchez, Olga, et al.
Publicado: (2013)

Pyrosequencing of 16S rRNA genes in fecal samples reveals high diversity of hindgut microflora in horses and potential links to chronic laminitis
por: Steelman, Samantha M, et al.
Publicado: (2012)

Impact of Fishmeal Replacement in Diets for Gilthead Sea Bream (Sparus aurata) on the Gastrointestinal Microbiota Determined by Pyrosequencing the 16S rRNA Gene
por: Estruch, G., et al.
Publicado: (2015)

The Genboree Microbiome Toolset and the analysis of 16S rRNA microbial sequences
por: Riehle, Kevin, et al.
Publicado: (2012)

Exploring the Hospital Microbiome by High-Resolution 16S rRNA Profiling
por: Rampelotto, Pabulo H., et al.
Publicado: (2019)

Comparative Analysis of Primers Used for 16S rRNA Gene Sequencing in Oral Microbiome Studies
por: Na, Hee Sam, et al.
Publicado: (2023)

Community Analysis of Chronic Wound Bacteria Using 16S rRNA Gene-Based Pyrosequencing: Impact of Diabetes and Antibiotics on Chronic Wound Microbiota
por: Price, Lance B., et al.
Publicado: (2009)

PyroTRF-ID: a novel bioinformatics methodology for the affiliation of terminal-restriction fragments using 16S rRNA gene pyrosequencing data
por: Weissbrodt, David G, et al.
Publicado: (2012)

Development of a pyrosequencing assay for the typing of alphaherpesviruses()
por: Fusco, G., et al.
Publicado: (2015)

Diversity of 23S rRNA Genes within Individual Prokaryotic Genomes
por: Pei, Anna, et al.
Publicado: (2009)

Cannot write session to /tmp/vufind_sessions/sess_bj0foscuja3mgf5blshs2gkcrk