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Adaptive Strategy for the Statistical Analysis of Connectomes
We study an adaptive statistical approach to analyze brain networks represented by brain connection matrices of interregional connectivity (connectomes). Our approach is at a middle level between a global analysis and single connections analysis by considering subnetworks of the global brain network...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3150413/ https://www.ncbi.nlm.nih.gov/pubmed/21829681 http://dx.doi.org/10.1371/journal.pone.0023009 |
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author | Meskaldji, Djalel Eddine Ottet, Marie-Christine Cammoun, Leila Hagmann, Patric Meuli, Reto Eliez, Stephan Thiran, Jean Philippe Morgenthaler, Stephan |
author_facet | Meskaldji, Djalel Eddine Ottet, Marie-Christine Cammoun, Leila Hagmann, Patric Meuli, Reto Eliez, Stephan Thiran, Jean Philippe Morgenthaler, Stephan |
author_sort | Meskaldji, Djalel Eddine |
collection | PubMed |
description | We study an adaptive statistical approach to analyze brain networks represented by brain connection matrices of interregional connectivity (connectomes). Our approach is at a middle level between a global analysis and single connections analysis by considering subnetworks of the global brain network. These subnetworks represent either the inter-connectivity between two brain anatomical regions or by the intra-connectivity within the same brain anatomical region. An appropriate summary statistic, that characterizes a meaningful feature of the subnetwork, is evaluated. Based on this summary statistic, a statistical test is performed to derive the corresponding p-value. The reformulation of the problem in this way reduces the number of statistical tests in an orderly fashion based on our understanding of the problem. Considering the global testing problem, the p-values are corrected to control the rate of false discoveries. Finally, the procedure is followed by a local investigation within the significant subnetworks. We contrast this strategy with the one based on the individual measures in terms of power. We show that this strategy has a great potential, in particular in cases where the subnetworks are well defined and the summary statistics are properly chosen. As an application example, we compare structural brain connection matrices of two groups of subjects with a 22q11.2 deletion syndrome, distinguished by their IQ scores. |
format | Online Article Text |
id | pubmed-3150413 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-31504132011-08-09 Adaptive Strategy for the Statistical Analysis of Connectomes Meskaldji, Djalel Eddine Ottet, Marie-Christine Cammoun, Leila Hagmann, Patric Meuli, Reto Eliez, Stephan Thiran, Jean Philippe Morgenthaler, Stephan PLoS One Research Article We study an adaptive statistical approach to analyze brain networks represented by brain connection matrices of interregional connectivity (connectomes). Our approach is at a middle level between a global analysis and single connections analysis by considering subnetworks of the global brain network. These subnetworks represent either the inter-connectivity between two brain anatomical regions or by the intra-connectivity within the same brain anatomical region. An appropriate summary statistic, that characterizes a meaningful feature of the subnetwork, is evaluated. Based on this summary statistic, a statistical test is performed to derive the corresponding p-value. The reformulation of the problem in this way reduces the number of statistical tests in an orderly fashion based on our understanding of the problem. Considering the global testing problem, the p-values are corrected to control the rate of false discoveries. Finally, the procedure is followed by a local investigation within the significant subnetworks. We contrast this strategy with the one based on the individual measures in terms of power. We show that this strategy has a great potential, in particular in cases where the subnetworks are well defined and the summary statistics are properly chosen. As an application example, we compare structural brain connection matrices of two groups of subjects with a 22q11.2 deletion syndrome, distinguished by their IQ scores. Public Library of Science 2011-08-04 /pmc/articles/PMC3150413/ /pubmed/21829681 http://dx.doi.org/10.1371/journal.pone.0023009 Text en Meskaldji et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Meskaldji, Djalel Eddine Ottet, Marie-Christine Cammoun, Leila Hagmann, Patric Meuli, Reto Eliez, Stephan Thiran, Jean Philippe Morgenthaler, Stephan Adaptive Strategy for the Statistical Analysis of Connectomes |
title | Adaptive Strategy for the Statistical Analysis of Connectomes |
title_full | Adaptive Strategy for the Statistical Analysis of Connectomes |
title_fullStr | Adaptive Strategy for the Statistical Analysis of Connectomes |
title_full_unstemmed | Adaptive Strategy for the Statistical Analysis of Connectomes |
title_short | Adaptive Strategy for the Statistical Analysis of Connectomes |
title_sort | adaptive strategy for the statistical analysis of connectomes |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3150413/ https://www.ncbi.nlm.nih.gov/pubmed/21829681 http://dx.doi.org/10.1371/journal.pone.0023009 |
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