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Optimizing automated characterization of liver fibrosis histological images by investigating color spaces at different resolutions

Texture analysis (TA) of histological images has recently received attention as an automated method of characterizing liver fibrosis. The colored staining methods used to identify different tissue components reveal various patterns that contribute in different ways to the digital texture of the imag...

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Autor principal: Mahmoud-Ghoneim, Doaa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3152895/
https://www.ncbi.nlm.nih.gov/pubmed/21756305
http://dx.doi.org/10.1186/1742-4682-8-25
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author Mahmoud-Ghoneim, Doaa
author_facet Mahmoud-Ghoneim, Doaa
author_sort Mahmoud-Ghoneim, Doaa
collection PubMed
description Texture analysis (TA) of histological images has recently received attention as an automated method of characterizing liver fibrosis. The colored staining methods used to identify different tissue components reveal various patterns that contribute in different ways to the digital texture of the image. A histological digital image can be represented with various color spaces. The approximation processes of pixel values that are carried out while converting between different color spaces can affect image texture and subsequently could influence the performance of TA. Conventional TA is carried out on grey scale images, which are a luminance approximation to the original RGB (Red, Green, and Blue) space. Currently, grey scale is considered sufficient for characterization of fibrosis but this may not be the case for sophisticated assessment of fibrosis or when resolution conditions vary. This paper investigates the accuracy of TA results on three color spaces, conventional grey scale, RGB, and Hue-Saturation-Intensity (HSI), at different resolutions. The results demonstrate that RGB is the most accurate in texture classification of liver images, producing better results, most notably at low resolution. Furthermore, the green channel, which is dominated by collagen fiber deposition, appears to provide most of the features for characterizing fibrosis images. The HSI space demonstrated a high percentage error for the majority of texture methods at all resolutions, suggesting that this space is insufficient for fibrosis characterization. The grey scale space produced good results at high resolution; however, errors increased as resolution decreased.
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spelling pubmed-31528952011-08-10 Optimizing automated characterization of liver fibrosis histological images by investigating color spaces at different resolutions Mahmoud-Ghoneim, Doaa Theor Biol Med Model Research Texture analysis (TA) of histological images has recently received attention as an automated method of characterizing liver fibrosis. The colored staining methods used to identify different tissue components reveal various patterns that contribute in different ways to the digital texture of the image. A histological digital image can be represented with various color spaces. The approximation processes of pixel values that are carried out while converting between different color spaces can affect image texture and subsequently could influence the performance of TA. Conventional TA is carried out on grey scale images, which are a luminance approximation to the original RGB (Red, Green, and Blue) space. Currently, grey scale is considered sufficient for characterization of fibrosis but this may not be the case for sophisticated assessment of fibrosis or when resolution conditions vary. This paper investigates the accuracy of TA results on three color spaces, conventional grey scale, RGB, and Hue-Saturation-Intensity (HSI), at different resolutions. The results demonstrate that RGB is the most accurate in texture classification of liver images, producing better results, most notably at low resolution. Furthermore, the green channel, which is dominated by collagen fiber deposition, appears to provide most of the features for characterizing fibrosis images. The HSI space demonstrated a high percentage error for the majority of texture methods at all resolutions, suggesting that this space is insufficient for fibrosis characterization. The grey scale space produced good results at high resolution; however, errors increased as resolution decreased. BioMed Central 2011-07-14 /pmc/articles/PMC3152895/ /pubmed/21756305 http://dx.doi.org/10.1186/1742-4682-8-25 Text en Copyright ©2011 Mahmoud-Ghoneim; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Mahmoud-Ghoneim, Doaa
Optimizing automated characterization of liver fibrosis histological images by investigating color spaces at different resolutions
title Optimizing automated characterization of liver fibrosis histological images by investigating color spaces at different resolutions
title_full Optimizing automated characterization of liver fibrosis histological images by investigating color spaces at different resolutions
title_fullStr Optimizing automated characterization of liver fibrosis histological images by investigating color spaces at different resolutions
title_full_unstemmed Optimizing automated characterization of liver fibrosis histological images by investigating color spaces at different resolutions
title_short Optimizing automated characterization of liver fibrosis histological images by investigating color spaces at different resolutions
title_sort optimizing automated characterization of liver fibrosis histological images by investigating color spaces at different resolutions
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3152895/
https://www.ncbi.nlm.nih.gov/pubmed/21756305
http://dx.doi.org/10.1186/1742-4682-8-25
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