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Novel Lipolytic Enzymes Identified from Metagenomic Library of Deep-Sea Sediment

Metagenomic library was constructed from a deep-sea sediment sample and screened for lipolytic activity. Open-reading frames of six positive clones showed only 33–58% amino acid identities to the known proteins. One of them was assigned to a new group while others were grouped into Families I and V...

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Autores principales: Jeon, Jeong Ho, Kim, Jun Tae, Lee, Hyun Sook, Kim, Sang-Jin, Kang, Sung Gyun, Choi, Sang Ho, Lee, Jung-Hyun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3154406/
https://www.ncbi.nlm.nih.gov/pubmed/21845199
http://dx.doi.org/10.1155/2011/271419
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author Jeon, Jeong Ho
Kim, Jun Tae
Lee, Hyun Sook
Kim, Sang-Jin
Kang, Sung Gyun
Choi, Sang Ho
Lee, Jung-Hyun
author_facet Jeon, Jeong Ho
Kim, Jun Tae
Lee, Hyun Sook
Kim, Sang-Jin
Kang, Sung Gyun
Choi, Sang Ho
Lee, Jung-Hyun
author_sort Jeon, Jeong Ho
collection PubMed
description Metagenomic library was constructed from a deep-sea sediment sample and screened for lipolytic activity. Open-reading frames of six positive clones showed only 33–58% amino acid identities to the known proteins. One of them was assigned to a new group while others were grouped into Families I and V or EstD Family. By employing a combination of approaches such as removing the signal sequence, coexpression of chaperone genes, and low temperature induction, we obtained five soluble recombinant proteins in Escherichia coli. The purified enzymes had optimum temperatures of 30–35°C and the cold-activity property. Among them, one enzyme showed lipase activity by preferentially hydrolyzing p-nitrophenyl palmitate and p-nitrophenyl stearate and high salt resistance with up to 4 M NaCl. Our research demonstrates the feasibility of developing novel lipolytic enzymes from marine environments by the combination of functional metagenomic approach and protein expression technology.
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spelling pubmed-31544062011-08-15 Novel Lipolytic Enzymes Identified from Metagenomic Library of Deep-Sea Sediment Jeon, Jeong Ho Kim, Jun Tae Lee, Hyun Sook Kim, Sang-Jin Kang, Sung Gyun Choi, Sang Ho Lee, Jung-Hyun Evid Based Complement Alternat Med Research Article Metagenomic library was constructed from a deep-sea sediment sample and screened for lipolytic activity. Open-reading frames of six positive clones showed only 33–58% amino acid identities to the known proteins. One of them was assigned to a new group while others were grouped into Families I and V or EstD Family. By employing a combination of approaches such as removing the signal sequence, coexpression of chaperone genes, and low temperature induction, we obtained five soluble recombinant proteins in Escherichia coli. The purified enzymes had optimum temperatures of 30–35°C and the cold-activity property. Among them, one enzyme showed lipase activity by preferentially hydrolyzing p-nitrophenyl palmitate and p-nitrophenyl stearate and high salt resistance with up to 4 M NaCl. Our research demonstrates the feasibility of developing novel lipolytic enzymes from marine environments by the combination of functional metagenomic approach and protein expression technology. Hindawi Publishing Corporation 2011 2011-08-07 /pmc/articles/PMC3154406/ /pubmed/21845199 http://dx.doi.org/10.1155/2011/271419 Text en Copyright © 2011 Jeong Ho Jeon et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Jeon, Jeong Ho
Kim, Jun Tae
Lee, Hyun Sook
Kim, Sang-Jin
Kang, Sung Gyun
Choi, Sang Ho
Lee, Jung-Hyun
Novel Lipolytic Enzymes Identified from Metagenomic Library of Deep-Sea Sediment
title Novel Lipolytic Enzymes Identified from Metagenomic Library of Deep-Sea Sediment
title_full Novel Lipolytic Enzymes Identified from Metagenomic Library of Deep-Sea Sediment
title_fullStr Novel Lipolytic Enzymes Identified from Metagenomic Library of Deep-Sea Sediment
title_full_unstemmed Novel Lipolytic Enzymes Identified from Metagenomic Library of Deep-Sea Sediment
title_short Novel Lipolytic Enzymes Identified from Metagenomic Library of Deep-Sea Sediment
title_sort novel lipolytic enzymes identified from metagenomic library of deep-sea sediment
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3154406/
https://www.ncbi.nlm.nih.gov/pubmed/21845199
http://dx.doi.org/10.1155/2011/271419
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