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Heterogeneous Computing for Vertebra Detection and Segmentation in X-Ray Images

The context of this work is related to the vertebra segmentation. The method we propose is based on the active shape model (ASM). An original approach taking advantage of the edge polygonal approximation was developed to locate the vertebra positions in a X-ray image. Despite the fact that segmentat...

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Autores principales: Lecron, Fabian, Mahmoudi, Sidi Ahmed, Benjelloun, Mohammed, Mahmoudi, Saïd, Manneback, Pierre
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3154518/
https://www.ncbi.nlm.nih.gov/pubmed/21860613
http://dx.doi.org/10.1155/2011/640208
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author Lecron, Fabian
Mahmoudi, Sidi Ahmed
Benjelloun, Mohammed
Mahmoudi, Saïd
Manneback, Pierre
author_facet Lecron, Fabian
Mahmoudi, Sidi Ahmed
Benjelloun, Mohammed
Mahmoudi, Saïd
Manneback, Pierre
author_sort Lecron, Fabian
collection PubMed
description The context of this work is related to the vertebra segmentation. The method we propose is based on the active shape model (ASM). An original approach taking advantage of the edge polygonal approximation was developed to locate the vertebra positions in a X-ray image. Despite the fact that segmentation results show good efficiency, the time is a key variable that has always to be optimized in a medical context. Therefore, we present how vertebra extraction can efficiently be performed in exploiting the full computing power of parallel (GPU) and heterogeneous (multi-CPU/multi-GPU) architectures. We propose a parallel hybrid implementation of the most intensive steps enabling to boost performance. Experimentations have been conducted using a set of high-resolution X-ray medical images, showing a global speedup ranging from 3 to 22, by comparison with the CPU implementation. Data transfer times between CPU and GPU memories were included in the execution times of our proposed implementation.
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spelling pubmed-31545182011-08-22 Heterogeneous Computing for Vertebra Detection and Segmentation in X-Ray Images Lecron, Fabian Mahmoudi, Sidi Ahmed Benjelloun, Mohammed Mahmoudi, Saïd Manneback, Pierre Int J Biomed Imaging Research Article The context of this work is related to the vertebra segmentation. The method we propose is based on the active shape model (ASM). An original approach taking advantage of the edge polygonal approximation was developed to locate the vertebra positions in a X-ray image. Despite the fact that segmentation results show good efficiency, the time is a key variable that has always to be optimized in a medical context. Therefore, we present how vertebra extraction can efficiently be performed in exploiting the full computing power of parallel (GPU) and heterogeneous (multi-CPU/multi-GPU) architectures. We propose a parallel hybrid implementation of the most intensive steps enabling to boost performance. Experimentations have been conducted using a set of high-resolution X-ray medical images, showing a global speedup ranging from 3 to 22, by comparison with the CPU implementation. Data transfer times between CPU and GPU memories were included in the execution times of our proposed implementation. Hindawi Publishing Corporation 2011 2011-08-09 /pmc/articles/PMC3154518/ /pubmed/21860613 http://dx.doi.org/10.1155/2011/640208 Text en Copyright © 2011 Fabian Lecron et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Lecron, Fabian
Mahmoudi, Sidi Ahmed
Benjelloun, Mohammed
Mahmoudi, Saïd
Manneback, Pierre
Heterogeneous Computing for Vertebra Detection and Segmentation in X-Ray Images
title Heterogeneous Computing for Vertebra Detection and Segmentation in X-Ray Images
title_full Heterogeneous Computing for Vertebra Detection and Segmentation in X-Ray Images
title_fullStr Heterogeneous Computing for Vertebra Detection and Segmentation in X-Ray Images
title_full_unstemmed Heterogeneous Computing for Vertebra Detection and Segmentation in X-Ray Images
title_short Heterogeneous Computing for Vertebra Detection and Segmentation in X-Ray Images
title_sort heterogeneous computing for vertebra detection and segmentation in x-ray images
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3154518/
https://www.ncbi.nlm.nih.gov/pubmed/21860613
http://dx.doi.org/10.1155/2011/640208
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