Cargando…
Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A(T))
Pyrolobus fumarii Blöchl et al. 1997 is the type species of the genus Pyrolobus, which belongs to the crenarchaeal family Pyrodictiaceae. The species is a facultatively microaerophilic non-motile crenarchaeon. It is of interest because of its isolated phylogenetic location in the tree of life and be...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Michigan State University
2011
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3156397/ https://www.ncbi.nlm.nih.gov/pubmed/21886865 http://dx.doi.org/10.4056/sigs.2014648 |
_version_ | 1782210190561509376 |
---|---|
author | Anderson, Iain Göker, Markus Nolan, Matt Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxanne Han, Cliff Goodwin, Lynne Pitluck, Sam Huntemann, Marcel Liolios, Konstantinos Ivanova, Natalia Pagani, Ioanna Mavromatis, Konstantinos Ovchinikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Brambilla, Evelyne-Marie Huber, Harald Yasawong, Montri Rohde, Manfred Spring, Stefan Abt, Birte Sikorski, Johannes Wirth, Reinhard Detter, John C. Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla |
author_facet | Anderson, Iain Göker, Markus Nolan, Matt Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxanne Han, Cliff Goodwin, Lynne Pitluck, Sam Huntemann, Marcel Liolios, Konstantinos Ivanova, Natalia Pagani, Ioanna Mavromatis, Konstantinos Ovchinikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Brambilla, Evelyne-Marie Huber, Harald Yasawong, Montri Rohde, Manfred Spring, Stefan Abt, Birte Sikorski, Johannes Wirth, Reinhard Detter, John C. Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla |
author_sort | Anderson, Iain |
collection | PubMed |
description | Pyrolobus fumarii Blöchl et al. 1997 is the type species of the genus Pyrolobus, which belongs to the crenarchaeal family Pyrodictiaceae. The species is a facultatively microaerophilic non-motile crenarchaeon. It is of interest because of its isolated phylogenetic location in the tree of life and because it is a hyperthermophilic chemolithoautotroph known as the primary producer of organic matter at deep-sea hydrothermal vents. P. fumarii exhibits currently the highest optimal growth temperature of all life forms on earth (106°C). This is the first completed genome sequence of a member of the genus Pyrolobus to be published and only the second genome sequence from a member of the family Pyrodictiaceae. Although Diversa Corporation announced the completion of sequencing of the P. fumarii genome on September 25, 2001, this sequence was never released to the public. The 1,843,267 bp long genome with its 1,986 protein-coding and 52 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. |
format | Online Article Text |
id | pubmed-3156397 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-31563972011-08-31 Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A(T)) Anderson, Iain Göker, Markus Nolan, Matt Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxanne Han, Cliff Goodwin, Lynne Pitluck, Sam Huntemann, Marcel Liolios, Konstantinos Ivanova, Natalia Pagani, Ioanna Mavromatis, Konstantinos Ovchinikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Brambilla, Evelyne-Marie Huber, Harald Yasawong, Montri Rohde, Manfred Spring, Stefan Abt, Birte Sikorski, Johannes Wirth, Reinhard Detter, John C. Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla Stand Genomic Sci Short Genome Reports Pyrolobus fumarii Blöchl et al. 1997 is the type species of the genus Pyrolobus, which belongs to the crenarchaeal family Pyrodictiaceae. The species is a facultatively microaerophilic non-motile crenarchaeon. It is of interest because of its isolated phylogenetic location in the tree of life and because it is a hyperthermophilic chemolithoautotroph known as the primary producer of organic matter at deep-sea hydrothermal vents. P. fumarii exhibits currently the highest optimal growth temperature of all life forms on earth (106°C). This is the first completed genome sequence of a member of the genus Pyrolobus to be published and only the second genome sequence from a member of the family Pyrodictiaceae. Although Diversa Corporation announced the completion of sequencing of the P. fumarii genome on September 25, 2001, this sequence was never released to the public. The 1,843,267 bp long genome with its 1,986 protein-coding and 52 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2011-07-01 /pmc/articles/PMC3156397/ /pubmed/21886865 http://dx.doi.org/10.4056/sigs.2014648 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Anderson, Iain Göker, Markus Nolan, Matt Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxanne Han, Cliff Goodwin, Lynne Pitluck, Sam Huntemann, Marcel Liolios, Konstantinos Ivanova, Natalia Pagani, Ioanna Mavromatis, Konstantinos Ovchinikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Brambilla, Evelyne-Marie Huber, Harald Yasawong, Montri Rohde, Manfred Spring, Stefan Abt, Birte Sikorski, Johannes Wirth, Reinhard Detter, John C. Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A(T)) |
title | Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A(T)) |
title_full | Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A(T)) |
title_fullStr | Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A(T)) |
title_full_unstemmed | Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A(T)) |
title_short | Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A(T)) |
title_sort | complete genome sequence of the hyperthermophilic chemolithoautotroph pyrolobus fumarii type strain (1a(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3156397/ https://www.ncbi.nlm.nih.gov/pubmed/21886865 http://dx.doi.org/10.4056/sigs.2014648 |
work_keys_str_mv | AT andersoniain completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT gokermarkus completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT nolanmatt completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT lucassusan completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT hammonnancy completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT deshpandeshweta completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT chengjanfang completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT tapiaroxanne completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT hancliff completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT goodwinlynne completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT pitlucksam completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT huntemannmarcel completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT liolioskonstantinos completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT ivanovanatalia completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT paganiioanna completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT mavromatiskonstantinos completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT ovchinikovagalina completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT patiamrita completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT chenamy completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT palaniappankrishna completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT landmiriam completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT hauserloren completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT brambillaevelynemarie completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT huberharald completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT yasawongmontri completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT rohdemanfred completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT springstefan completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT abtbirte completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT sikorskijohannes completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT wirthreinhard completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT detterjohnc completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT woyketanja completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT bristowjames completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT eisenjonathana completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT markowitzvictor completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT hugenholtzphilip completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT kyrpidesnikosc completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT klenkhanspeter completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at AT lapidusalla completegenomesequenceofthehyperthermophilicchemolithoautotrophpyrolobusfumariitypestrain1at |