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Complete genome sequence of the extremely halophilic Halanaerobium praevalens type strain (GSL(T))

Halanaerobium praevalens Zeikus et al. 1984 is the type species of the genus Halanaerobium, which in turn is the type genus of the family Halanaerobiaceae. The species is of interest because it is able to reduce a variety of nitro-substituted aromatic compounds at a high rate, and because of its abi...

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Autores principales: Ivanova, Natalia, Sikorski, Johannes, Chertkov, Olga, Nolan, Matt, Lucas, Susan, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Fang, Tapia, Roxanne, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Huntemann, Marcel, Liolios, Konstantinos, Pagani, Ioanna, Mavromatis, Konstantinos, Ovchinikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Brambilla, Evelyne-Marie, Kannan, K. Palani, Rohde, Manfred, Tindall, Brian J., Göker, Markus, Detter, John C., Woyke, Tanja, Bristow, James, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter, Lapidus, Alla
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3156398/
https://www.ncbi.nlm.nih.gov/pubmed/21886858
http://dx.doi.org/10.4056/sigs.1824509
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author Ivanova, Natalia
Sikorski, Johannes
Chertkov, Olga
Nolan, Matt
Lucas, Susan
Hammon, Nancy
Deshpande, Shweta
Cheng, Jan-Fang
Tapia, Roxanne
Han, Cliff
Goodwin, Lynne
Pitluck, Sam
Huntemann, Marcel
Liolios, Konstantinos
Pagani, Ioanna
Mavromatis, Konstantinos
Ovchinikova, Galina
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Brambilla, Evelyne-Marie
Kannan, K. Palani
Rohde, Manfred
Tindall, Brian J.
Göker, Markus
Detter, John C.
Woyke, Tanja
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Lapidus, Alla
author_facet Ivanova, Natalia
Sikorski, Johannes
Chertkov, Olga
Nolan, Matt
Lucas, Susan
Hammon, Nancy
Deshpande, Shweta
Cheng, Jan-Fang
Tapia, Roxanne
Han, Cliff
Goodwin, Lynne
Pitluck, Sam
Huntemann, Marcel
Liolios, Konstantinos
Pagani, Ioanna
Mavromatis, Konstantinos
Ovchinikova, Galina
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Brambilla, Evelyne-Marie
Kannan, K. Palani
Rohde, Manfred
Tindall, Brian J.
Göker, Markus
Detter, John C.
Woyke, Tanja
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Lapidus, Alla
author_sort Ivanova, Natalia
collection PubMed
description Halanaerobium praevalens Zeikus et al. 1984 is the type species of the genus Halanaerobium, which in turn is the type genus of the family Halanaerobiaceae. The species is of interest because it is able to reduce a variety of nitro-substituted aromatic compounds at a high rate, and because of its ability to degrade organic pollutants. The strain is also of interest because it functions as a hydrolytic bacterium, fermenting complex organic matter and producing intermediary metabolites for other trophic groups such as sulfate-reducing and methanogenic bacteria. It is further reported as being involved in carbon removal in the Great Salt Lake, its source of isolation. This is the first completed genome sequence of a representative of the genus Halanaerobium and the second genome sequence from a type strain of the family Halanaerobiaceae. The 2,309,262 bp long genome with its 2,110 protein-coding and 70 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
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spelling pubmed-31563982011-08-31 Complete genome sequence of the extremely halophilic Halanaerobium praevalens type strain (GSL(T)) Ivanova, Natalia Sikorski, Johannes Chertkov, Olga Nolan, Matt Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Tapia, Roxanne Han, Cliff Goodwin, Lynne Pitluck, Sam Huntemann, Marcel Liolios, Konstantinos Pagani, Ioanna Mavromatis, Konstantinos Ovchinikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Brambilla, Evelyne-Marie Kannan, K. Palani Rohde, Manfred Tindall, Brian J. Göker, Markus Detter, John C. Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla Stand Genomic Sci Short Genome Reports Halanaerobium praevalens Zeikus et al. 1984 is the type species of the genus Halanaerobium, which in turn is the type genus of the family Halanaerobiaceae. The species is of interest because it is able to reduce a variety of nitro-substituted aromatic compounds at a high rate, and because of its ability to degrade organic pollutants. The strain is also of interest because it functions as a hydrolytic bacterium, fermenting complex organic matter and producing intermediary metabolites for other trophic groups such as sulfate-reducing and methanogenic bacteria. It is further reported as being involved in carbon removal in the Great Salt Lake, its source of isolation. This is the first completed genome sequence of a representative of the genus Halanaerobium and the second genome sequence from a type strain of the family Halanaerobiaceae. The 2,309,262 bp long genome with its 2,110 protein-coding and 70 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2011-06-30 /pmc/articles/PMC3156398/ /pubmed/21886858 http://dx.doi.org/10.4056/sigs.1824509 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Ivanova, Natalia
Sikorski, Johannes
Chertkov, Olga
Nolan, Matt
Lucas, Susan
Hammon, Nancy
Deshpande, Shweta
Cheng, Jan-Fang
Tapia, Roxanne
Han, Cliff
Goodwin, Lynne
Pitluck, Sam
Huntemann, Marcel
Liolios, Konstantinos
Pagani, Ioanna
Mavromatis, Konstantinos
Ovchinikova, Galina
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Brambilla, Evelyne-Marie
Kannan, K. Palani
Rohde, Manfred
Tindall, Brian J.
Göker, Markus
Detter, John C.
Woyke, Tanja
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Lapidus, Alla
Complete genome sequence of the extremely halophilic Halanaerobium praevalens type strain (GSL(T))
title Complete genome sequence of the extremely halophilic Halanaerobium praevalens type strain (GSL(T))
title_full Complete genome sequence of the extremely halophilic Halanaerobium praevalens type strain (GSL(T))
title_fullStr Complete genome sequence of the extremely halophilic Halanaerobium praevalens type strain (GSL(T))
title_full_unstemmed Complete genome sequence of the extremely halophilic Halanaerobium praevalens type strain (GSL(T))
title_short Complete genome sequence of the extremely halophilic Halanaerobium praevalens type strain (GSL(T))
title_sort complete genome sequence of the extremely halophilic halanaerobium praevalens type strain (gsl(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3156398/
https://www.ncbi.nlm.nih.gov/pubmed/21886858
http://dx.doi.org/10.4056/sigs.1824509
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