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Complete genome sequence of Treponema succinifaciens type strain (6091(T))
Treponema succinifaciens Cwyk and Canale-Parola 1981 is of interest because this strictly anaerobic, apathogenic member of the genus Treponema oxidizes carbohydrates and couples the Embden-Meyerhof pathway via activity of a pyruvate-formate lyase to the production of acetyl-coenzyme A and formate. T...
| Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Michigan State University
2011
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| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3156407/ https://www.ncbi.nlm.nih.gov/pubmed/21886863 http://dx.doi.org/10.4056/sigs.1984594 |
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| author | Han, Cliff Gronow, Sabine Teshima, Hazuki Lapidus, Alla Nolan, Matt Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Zeytun, Ahmed Tapia, Roxanne Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Ivanova, Natalia Mavromatis, Konstantinos Mikhailova, Natalia Huntemann, Marcel Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Brambilla, Evelyne-Marie Rohde, Manfred Göker, Markus Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Detter, John C. |
| author_facet | Han, Cliff Gronow, Sabine Teshima, Hazuki Lapidus, Alla Nolan, Matt Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Zeytun, Ahmed Tapia, Roxanne Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Ivanova, Natalia Mavromatis, Konstantinos Mikhailova, Natalia Huntemann, Marcel Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Brambilla, Evelyne-Marie Rohde, Manfred Göker, Markus Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Detter, John C. |
| author_sort | Han, Cliff |
| collection | PubMed |
| description | Treponema succinifaciens Cwyk and Canale-Parola 1981 is of interest because this strictly anaerobic, apathogenic member of the genus Treponema oxidizes carbohydrates and couples the Embden-Meyerhof pathway via activity of a pyruvate-formate lyase to the production of acetyl-coenzyme A and formate. This feature separates this species from most other anaerobic spirochetes. The genome of T. succinifaciens 6091(T) is only the second completed and published type strain genome from the genus Treponema in the family Spirochaetaceae. The 2,897,425 bp long genome with one plasmid harbors 2,723 protein-coding and 63 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project. |
| format | Online Article Text |
| id | pubmed-3156407 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2011 |
| publisher | Michigan State University |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-31564072011-08-31 Complete genome sequence of Treponema succinifaciens type strain (6091(T)) Han, Cliff Gronow, Sabine Teshima, Hazuki Lapidus, Alla Nolan, Matt Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Zeytun, Ahmed Tapia, Roxanne Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Ivanova, Natalia Mavromatis, Konstantinos Mikhailova, Natalia Huntemann, Marcel Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Brambilla, Evelyne-Marie Rohde, Manfred Göker, Markus Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Detter, John C. Stand Genomic Sci Short Genome Reports Treponema succinifaciens Cwyk and Canale-Parola 1981 is of interest because this strictly anaerobic, apathogenic member of the genus Treponema oxidizes carbohydrates and couples the Embden-Meyerhof pathway via activity of a pyruvate-formate lyase to the production of acetyl-coenzyme A and formate. This feature separates this species from most other anaerobic spirochetes. The genome of T. succinifaciens 6091(T) is only the second completed and published type strain genome from the genus Treponema in the family Spirochaetaceae. The 2,897,425 bp long genome with one plasmid harbors 2,723 protein-coding and 63 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2011-06-30 /pmc/articles/PMC3156407/ /pubmed/21886863 http://dx.doi.org/10.4056/sigs.1984594 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
| spellingShingle | Short Genome Reports Han, Cliff Gronow, Sabine Teshima, Hazuki Lapidus, Alla Nolan, Matt Lucas, Susan Hammon, Nancy Deshpande, Shweta Cheng, Jan-Fang Zeytun, Ahmed Tapia, Roxanne Goodwin, Lynne Pitluck, Sam Liolios, Konstantinos Pagani, Ioanna Ivanova, Natalia Mavromatis, Konstantinos Mikhailova, Natalia Huntemann, Marcel Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Brambilla, Evelyne-Marie Rohde, Manfred Göker, Markus Woyke, Tanja Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Detter, John C. Complete genome sequence of Treponema succinifaciens type strain (6091(T)) |
| title | Complete genome sequence of Treponema succinifaciens type strain (6091(T)) |
| title_full | Complete genome sequence of Treponema succinifaciens type strain (6091(T)) |
| title_fullStr | Complete genome sequence of Treponema succinifaciens type strain (6091(T)) |
| title_full_unstemmed | Complete genome sequence of Treponema succinifaciens type strain (6091(T)) |
| title_short | Complete genome sequence of Treponema succinifaciens type strain (6091(T)) |
| title_sort | complete genome sequence of treponema succinifaciens type strain (6091(t)) |
| topic | Short Genome Reports |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3156407/ https://www.ncbi.nlm.nih.gov/pubmed/21886863 http://dx.doi.org/10.4056/sigs.1984594 |
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