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Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event

In humans and mice, there are 11 genes derived from sushi-ichi related retrotransposons, some of which are known to play essential roles in placental development. Interestingly, this family of retrotransposons was thought to exist only in eutherian mammals, indicating their significant contributions...

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Autores principales: Ono, Ryuichi, Kuroki, Yoko, Naruse, Mie, Ishii, Masayuki, Iwasaki, Sawa, Toyoda, Atsushi, Fujiyama, Asao, Shaw, Geoff, Renfree, Marilyn B., Kaneko-Ishino, Tomoko, Ishino, Fumitoshi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3158469/
https://www.ncbi.nlm.nih.gov/pubmed/21636603
http://dx.doi.org/10.1093/dnares/dsr012
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author Ono, Ryuichi
Kuroki, Yoko
Naruse, Mie
Ishii, Masayuki
Iwasaki, Sawa
Toyoda, Atsushi
Fujiyama, Asao
Shaw, Geoff
Renfree, Marilyn B.
Kaneko-Ishino, Tomoko
Ishino, Fumitoshi
author_facet Ono, Ryuichi
Kuroki, Yoko
Naruse, Mie
Ishii, Masayuki
Iwasaki, Sawa
Toyoda, Atsushi
Fujiyama, Asao
Shaw, Geoff
Renfree, Marilyn B.
Kaneko-Ishino, Tomoko
Ishino, Fumitoshi
author_sort Ono, Ryuichi
collection PubMed
description In humans and mice, there are 11 genes derived from sushi-ichi related retrotransposons, some of which are known to play essential roles in placental development. Interestingly, this family of retrotransposons was thought to exist only in eutherian mammals, indicating their significant contributions to the eutherian evolution, but at least one, PEG10, is conserved between marsupials and eutherians. Here we report a novel sushi-ichi retrotransposon-derived gene, SIRH12, in the tammar wallaby, an Australian marsupial species of the kangaroo family. SIRH12 encodes a protein highly homologous to the sushi-ichi retrotransposon Gag protein in the tammar wallaby, while SIRH12 in the South American short-tailed grey opossum is a pseudogene degenerated by accumulation of multiple nonsense mutations. This suggests that SIRH12 retrotransposition occurred only in the marsupial lineage but acquired and retained some as yet unidentified novel function, at least in the lineage of the tammar wallaby.
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spelling pubmed-31584692011-08-19 Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event Ono, Ryuichi Kuroki, Yoko Naruse, Mie Ishii, Masayuki Iwasaki, Sawa Toyoda, Atsushi Fujiyama, Asao Shaw, Geoff Renfree, Marilyn B. Kaneko-Ishino, Tomoko Ishino, Fumitoshi DNA Res Full Papers In humans and mice, there are 11 genes derived from sushi-ichi related retrotransposons, some of which are known to play essential roles in placental development. Interestingly, this family of retrotransposons was thought to exist only in eutherian mammals, indicating their significant contributions to the eutherian evolution, but at least one, PEG10, is conserved between marsupials and eutherians. Here we report a novel sushi-ichi retrotransposon-derived gene, SIRH12, in the tammar wallaby, an Australian marsupial species of the kangaroo family. SIRH12 encodes a protein highly homologous to the sushi-ichi retrotransposon Gag protein in the tammar wallaby, while SIRH12 in the South American short-tailed grey opossum is a pseudogene degenerated by accumulation of multiple nonsense mutations. This suggests that SIRH12 retrotransposition occurred only in the marsupial lineage but acquired and retained some as yet unidentified novel function, at least in the lineage of the tammar wallaby. Oxford University Press 2011-08 2011-06-02 /pmc/articles/PMC3158469/ /pubmed/21636603 http://dx.doi.org/10.1093/dnares/dsr012 Text en © The Author 2011. Published by Oxford University Press on behalf of Kazusa DNA Research Institute. http://creativecommons.org/licenses/by-nc/2.5/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Full Papers
Ono, Ryuichi
Kuroki, Yoko
Naruse, Mie
Ishii, Masayuki
Iwasaki, Sawa
Toyoda, Atsushi
Fujiyama, Asao
Shaw, Geoff
Renfree, Marilyn B.
Kaneko-Ishino, Tomoko
Ishino, Fumitoshi
Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event
title Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event
title_full Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event
title_fullStr Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event
title_full_unstemmed Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event
title_short Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event
title_sort identification of tammar wallaby sirh12, derived from a marsupial-specific retrotransposition event
topic Full Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3158469/
https://www.ncbi.nlm.nih.gov/pubmed/21636603
http://dx.doi.org/10.1093/dnares/dsr012
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