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Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event
In humans and mice, there are 11 genes derived from sushi-ichi related retrotransposons, some of which are known to play essential roles in placental development. Interestingly, this family of retrotransposons was thought to exist only in eutherian mammals, indicating their significant contributions...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3158469/ https://www.ncbi.nlm.nih.gov/pubmed/21636603 http://dx.doi.org/10.1093/dnares/dsr012 |
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author | Ono, Ryuichi Kuroki, Yoko Naruse, Mie Ishii, Masayuki Iwasaki, Sawa Toyoda, Atsushi Fujiyama, Asao Shaw, Geoff Renfree, Marilyn B. Kaneko-Ishino, Tomoko Ishino, Fumitoshi |
author_facet | Ono, Ryuichi Kuroki, Yoko Naruse, Mie Ishii, Masayuki Iwasaki, Sawa Toyoda, Atsushi Fujiyama, Asao Shaw, Geoff Renfree, Marilyn B. Kaneko-Ishino, Tomoko Ishino, Fumitoshi |
author_sort | Ono, Ryuichi |
collection | PubMed |
description | In humans and mice, there are 11 genes derived from sushi-ichi related retrotransposons, some of which are known to play essential roles in placental development. Interestingly, this family of retrotransposons was thought to exist only in eutherian mammals, indicating their significant contributions to the eutherian evolution, but at least one, PEG10, is conserved between marsupials and eutherians. Here we report a novel sushi-ichi retrotransposon-derived gene, SIRH12, in the tammar wallaby, an Australian marsupial species of the kangaroo family. SIRH12 encodes a protein highly homologous to the sushi-ichi retrotransposon Gag protein in the tammar wallaby, while SIRH12 in the South American short-tailed grey opossum is a pseudogene degenerated by accumulation of multiple nonsense mutations. This suggests that SIRH12 retrotransposition occurred only in the marsupial lineage but acquired and retained some as yet unidentified novel function, at least in the lineage of the tammar wallaby. |
format | Online Article Text |
id | pubmed-3158469 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-31584692011-08-19 Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event Ono, Ryuichi Kuroki, Yoko Naruse, Mie Ishii, Masayuki Iwasaki, Sawa Toyoda, Atsushi Fujiyama, Asao Shaw, Geoff Renfree, Marilyn B. Kaneko-Ishino, Tomoko Ishino, Fumitoshi DNA Res Full Papers In humans and mice, there are 11 genes derived from sushi-ichi related retrotransposons, some of which are known to play essential roles in placental development. Interestingly, this family of retrotransposons was thought to exist only in eutherian mammals, indicating their significant contributions to the eutherian evolution, but at least one, PEG10, is conserved between marsupials and eutherians. Here we report a novel sushi-ichi retrotransposon-derived gene, SIRH12, in the tammar wallaby, an Australian marsupial species of the kangaroo family. SIRH12 encodes a protein highly homologous to the sushi-ichi retrotransposon Gag protein in the tammar wallaby, while SIRH12 in the South American short-tailed grey opossum is a pseudogene degenerated by accumulation of multiple nonsense mutations. This suggests that SIRH12 retrotransposition occurred only in the marsupial lineage but acquired and retained some as yet unidentified novel function, at least in the lineage of the tammar wallaby. Oxford University Press 2011-08 2011-06-02 /pmc/articles/PMC3158469/ /pubmed/21636603 http://dx.doi.org/10.1093/dnares/dsr012 Text en © The Author 2011. Published by Oxford University Press on behalf of Kazusa DNA Research Institute. http://creativecommons.org/licenses/by-nc/2.5/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Full Papers Ono, Ryuichi Kuroki, Yoko Naruse, Mie Ishii, Masayuki Iwasaki, Sawa Toyoda, Atsushi Fujiyama, Asao Shaw, Geoff Renfree, Marilyn B. Kaneko-Ishino, Tomoko Ishino, Fumitoshi Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event |
title | Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event |
title_full | Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event |
title_fullStr | Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event |
title_full_unstemmed | Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event |
title_short | Identification of tammar wallaby SIRH12, derived from a marsupial-specific retrotransposition event |
title_sort | identification of tammar wallaby sirh12, derived from a marsupial-specific retrotransposition event |
topic | Full Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3158469/ https://www.ncbi.nlm.nih.gov/pubmed/21636603 http://dx.doi.org/10.1093/dnares/dsr012 |
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