Cargando…

BioIMAX: A Web 2.0 approach for easy exploratory and collaborative access to multivariate bioimage data

BACKGROUND: Innovations in biological and biomedical imaging produce complex high-content and multivariate image data. For decision-making and generation of hypotheses, scientists need novel information technology tools that enable them to visually explore and analyze the data and to discuss and com...

Descripción completa

Detalles Bibliográficos
Autores principales: Loyek, Christian, Rajpoot, Nasir M, Khan, Michael, Nattkemper, Tim W
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3161928/
https://www.ncbi.nlm.nih.gov/pubmed/21777450
http://dx.doi.org/10.1186/1471-2105-12-297
_version_ 1782210759290257408
author Loyek, Christian
Rajpoot, Nasir M
Khan, Michael
Nattkemper, Tim W
author_facet Loyek, Christian
Rajpoot, Nasir M
Khan, Michael
Nattkemper, Tim W
author_sort Loyek, Christian
collection PubMed
description BACKGROUND: Innovations in biological and biomedical imaging produce complex high-content and multivariate image data. For decision-making and generation of hypotheses, scientists need novel information technology tools that enable them to visually explore and analyze the data and to discuss and communicate results or findings with collaborating experts from various places. RESULTS: In this paper, we present a novel Web2.0 approach, BioIMAX, for the collaborative exploration and analysis of multivariate image data by combining the webs collaboration and distribution architecture with the interface interactivity and computation power of desktop applications, recently called rich internet application. CONCLUSIONS: BioIMAX allows scientists to discuss and share data or results with collaborating experts and to visualize, annotate, and explore multivariate image data within one web-based platform from any location via a standard web browser requiring only a username and a password. BioIMAX can be accessed at http://ani.cebitec.uni-bielefeld.de/BioIMAX with the username "test" and the password "test1" for testing purposes.
format Online
Article
Text
id pubmed-3161928
institution National Center for Biotechnology Information
language English
publishDate 2011
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-31619282011-08-26 BioIMAX: A Web 2.0 approach for easy exploratory and collaborative access to multivariate bioimage data Loyek, Christian Rajpoot, Nasir M Khan, Michael Nattkemper, Tim W BMC Bioinformatics Software BACKGROUND: Innovations in biological and biomedical imaging produce complex high-content and multivariate image data. For decision-making and generation of hypotheses, scientists need novel information technology tools that enable them to visually explore and analyze the data and to discuss and communicate results or findings with collaborating experts from various places. RESULTS: In this paper, we present a novel Web2.0 approach, BioIMAX, for the collaborative exploration and analysis of multivariate image data by combining the webs collaboration and distribution architecture with the interface interactivity and computation power of desktop applications, recently called rich internet application. CONCLUSIONS: BioIMAX allows scientists to discuss and share data or results with collaborating experts and to visualize, annotate, and explore multivariate image data within one web-based platform from any location via a standard web browser requiring only a username and a password. BioIMAX can be accessed at http://ani.cebitec.uni-bielefeld.de/BioIMAX with the username "test" and the password "test1" for testing purposes. BioMed Central 2011-07-21 /pmc/articles/PMC3161928/ /pubmed/21777450 http://dx.doi.org/10.1186/1471-2105-12-297 Text en Copyright © 2011 Loyek et al; licensee BioMed Central Ltd. https://creativecommons.org/licenses/by/2.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0 (https://creativecommons.org/licenses/by/2.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Software
Loyek, Christian
Rajpoot, Nasir M
Khan, Michael
Nattkemper, Tim W
BioIMAX: A Web 2.0 approach for easy exploratory and collaborative access to multivariate bioimage data
title BioIMAX: A Web 2.0 approach for easy exploratory and collaborative access to multivariate bioimage data
title_full BioIMAX: A Web 2.0 approach for easy exploratory and collaborative access to multivariate bioimage data
title_fullStr BioIMAX: A Web 2.0 approach for easy exploratory and collaborative access to multivariate bioimage data
title_full_unstemmed BioIMAX: A Web 2.0 approach for easy exploratory and collaborative access to multivariate bioimage data
title_short BioIMAX: A Web 2.0 approach for easy exploratory and collaborative access to multivariate bioimage data
title_sort bioimax: a web 2.0 approach for easy exploratory and collaborative access to multivariate bioimage data
topic Software
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3161928/
https://www.ncbi.nlm.nih.gov/pubmed/21777450
http://dx.doi.org/10.1186/1471-2105-12-297
work_keys_str_mv AT loyekchristian bioimaxaweb20approachforeasyexploratoryandcollaborativeaccesstomultivariatebioimagedata
AT rajpootnasirm bioimaxaweb20approachforeasyexploratoryandcollaborativeaccesstomultivariatebioimagedata
AT khanmichael bioimaxaweb20approachforeasyexploratoryandcollaborativeaccesstomultivariatebioimagedata
AT nattkempertimw bioimaxaweb20approachforeasyexploratoryandcollaborativeaccesstomultivariatebioimagedata