Cargando…
Cross-species protein sequence and gene structure prediction with fine-tuned Webscipio 2.0 and Scipio
BACKGROUND: Obtaining transcripts of homologs of closely related organisms and retrieving the reconstructed exon-intron patterns of the genes is a very important process during the analysis of the evolution of a protein family and the comparative analysis of the exon-intron structure of a certain ge...
Autores principales: | Hatje, Klas, Keller, Oliver, Hammesfahr, Björn, Pillmann, Holger, Waack, Stephan, Kollmar, Martin |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2011
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3162530/ https://www.ncbi.nlm.nih.gov/pubmed/21798037 http://dx.doi.org/10.1186/1756-0500-4-265 |
Ejemplares similares
-
WebScipio: reconstructing alternative splice variants of eukaryotic proteins
por: Hatje, Klas, et al.
Publicado: (2013) -
WebScipio: An online tool for the determination of gene structures using protein sequences
por: Odronitz, Florian, et al.
Publicado: (2008) -
Predicting mutually exclusive spliced exons based on exon length, splice site and reading frame conservation, and exon sequence homology
por: Pillmann, Holger, et al.
Publicado: (2011) -
Scipio: Using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related species
por: Keller, Oliver, et al.
Publicado: (2008) -
Critical assessment of coiled-coil predictions based on protein structure data
por: Simm, Dominic, et al.
Publicado: (2021)