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Detection of putative new mutacins by bioinformatic analysis using available web tools
In order to characterise new bacteriocins produced by Streptococcus mutans we perform a complete bioinformatic analyses by scanning the genome sequence of strains UA159 and NN2025. By searching in the adjacent genomic context of the two-component signal transduction system we predicted the existence...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2011
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3162582/ https://www.ncbi.nlm.nih.gov/pubmed/21756306 http://dx.doi.org/10.1186/1756-0381-4-22 |
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author | Nicolas, Guillaume G |
author_facet | Nicolas, Guillaume G |
author_sort | Nicolas, Guillaume G |
collection | PubMed |
description | In order to characterise new bacteriocins produced by Streptococcus mutans we perform a complete bioinformatic analyses by scanning the genome sequence of strains UA159 and NN2025. By searching in the adjacent genomic context of the two-component signal transduction system we predicted the existence of many putative new bacteriocins' maturation pathways and some of them were only exclusive to a group of Streptococcus. Computational genomic and proteomic analysis combined to predictive functionnal analysis represent an alternative way for rapid identification of new putative bacteriocins as well as new potential antimicrobial drugs compared to the more traditional methods of drugs discovery using antagonism tests. |
format | Online Article Text |
id | pubmed-3162582 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-31625822011-08-27 Detection of putative new mutacins by bioinformatic analysis using available web tools Nicolas, Guillaume G BioData Min Short Report In order to characterise new bacteriocins produced by Streptococcus mutans we perform a complete bioinformatic analyses by scanning the genome sequence of strains UA159 and NN2025. By searching in the adjacent genomic context of the two-component signal transduction system we predicted the existence of many putative new bacteriocins' maturation pathways and some of them were only exclusive to a group of Streptococcus. Computational genomic and proteomic analysis combined to predictive functionnal analysis represent an alternative way for rapid identification of new putative bacteriocins as well as new potential antimicrobial drugs compared to the more traditional methods of drugs discovery using antagonism tests. BioMed Central 2011-07-14 /pmc/articles/PMC3162582/ /pubmed/21756306 http://dx.doi.org/10.1186/1756-0381-4-22 Text en Copyright ©2011 Nicolas; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Report Nicolas, Guillaume G Detection of putative new mutacins by bioinformatic analysis using available web tools |
title | Detection of putative new mutacins by bioinformatic analysis using available web tools |
title_full | Detection of putative new mutacins by bioinformatic analysis using available web tools |
title_fullStr | Detection of putative new mutacins by bioinformatic analysis using available web tools |
title_full_unstemmed | Detection of putative new mutacins by bioinformatic analysis using available web tools |
title_short | Detection of putative new mutacins by bioinformatic analysis using available web tools |
title_sort | detection of putative new mutacins by bioinformatic analysis using available web tools |
topic | Short Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3162582/ https://www.ncbi.nlm.nih.gov/pubmed/21756306 http://dx.doi.org/10.1186/1756-0381-4-22 |
work_keys_str_mv | AT nicolasguillaumeg detectionofputativenewmutacinsbybioinformaticanalysisusingavailablewebtools |