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Structural and Content Diversity of Mitochondrial Genome in Beet: A Comparative Genomic Analysis

Despite their monophyletic origin, mitochondrial (mt) genomes of plants and animals have developed contrasted evolutionary paths over time. Animal mt genomes are generally small, compact, and exhibit high mutation rates, whereas plant mt genomes exhibit low mutation rates, little compactness, larger...

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Autores principales: Darracq, A., Varré, J. S., Maréchal-Drouard, L., Courseaux, A., Castric, V., Saumitou-Laprade, P., Oztas, S., Lenoble, P., Vacherie, B., Barbe, V., Touzet, P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3163473/
https://www.ncbi.nlm.nih.gov/pubmed/21602571
http://dx.doi.org/10.1093/gbe/evr042
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author Darracq, A.
Varré, J. S.
Maréchal-Drouard, L.
Courseaux, A.
Castric, V.
Saumitou-Laprade, P.
Oztas, S.
Lenoble, P.
Vacherie, B.
Barbe, V.
Touzet, P.
author_facet Darracq, A.
Varré, J. S.
Maréchal-Drouard, L.
Courseaux, A.
Castric, V.
Saumitou-Laprade, P.
Oztas, S.
Lenoble, P.
Vacherie, B.
Barbe, V.
Touzet, P.
author_sort Darracq, A.
collection PubMed
description Despite their monophyletic origin, mitochondrial (mt) genomes of plants and animals have developed contrasted evolutionary paths over time. Animal mt genomes are generally small, compact, and exhibit high mutation rates, whereas plant mt genomes exhibit low mutation rates, little compactness, larger sizes, and highly rearranged structures. We present the (nearly) whole sequences of five new mt genomes in the Beta genus: four from Beta vulgaris and one from B. macrocarpa, a sister species belonging to the same Beta section. We pooled our results with two previously sequenced genomes of B. vulgaris and studied genome diversity at the species level with an emphasis on cytoplasmic male-sterilizing (CMS) genomes. We showed that, contrary to what was previously assumed, all three CMS genomes belong to a single sterile lineage. In addition, the CMSs seem to have undergone an acceleration of the rates of substitution and rearrangement. This study suggests that male sterility emergence might have been favored by faster rates of evolution, unless CMS itself caused faster evolution.
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spelling pubmed-31634732011-10-05 Structural and Content Diversity of Mitochondrial Genome in Beet: A Comparative Genomic Analysis Darracq, A. Varré, J. S. Maréchal-Drouard, L. Courseaux, A. Castric, V. Saumitou-Laprade, P. Oztas, S. Lenoble, P. Vacherie, B. Barbe, V. Touzet, P. Genome Biol Evol Research Articles Despite their monophyletic origin, mitochondrial (mt) genomes of plants and animals have developed contrasted evolutionary paths over time. Animal mt genomes are generally small, compact, and exhibit high mutation rates, whereas plant mt genomes exhibit low mutation rates, little compactness, larger sizes, and highly rearranged structures. We present the (nearly) whole sequences of five new mt genomes in the Beta genus: four from Beta vulgaris and one from B. macrocarpa, a sister species belonging to the same Beta section. We pooled our results with two previously sequenced genomes of B. vulgaris and studied genome diversity at the species level with an emphasis on cytoplasmic male-sterilizing (CMS) genomes. We showed that, contrary to what was previously assumed, all three CMS genomes belong to a single sterile lineage. In addition, the CMSs seem to have undergone an acceleration of the rates of substitution and rearrangement. This study suggests that male sterility emergence might have been favored by faster rates of evolution, unless CMS itself caused faster evolution. Oxford University Press 2011-05-21 /pmc/articles/PMC3163473/ /pubmed/21602571 http://dx.doi.org/10.1093/gbe/evr042 Text en © The Author(s) 2011. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Darracq, A.
Varré, J. S.
Maréchal-Drouard, L.
Courseaux, A.
Castric, V.
Saumitou-Laprade, P.
Oztas, S.
Lenoble, P.
Vacherie, B.
Barbe, V.
Touzet, P.
Structural and Content Diversity of Mitochondrial Genome in Beet: A Comparative Genomic Analysis
title Structural and Content Diversity of Mitochondrial Genome in Beet: A Comparative Genomic Analysis
title_full Structural and Content Diversity of Mitochondrial Genome in Beet: A Comparative Genomic Analysis
title_fullStr Structural and Content Diversity of Mitochondrial Genome in Beet: A Comparative Genomic Analysis
title_full_unstemmed Structural and Content Diversity of Mitochondrial Genome in Beet: A Comparative Genomic Analysis
title_short Structural and Content Diversity of Mitochondrial Genome in Beet: A Comparative Genomic Analysis
title_sort structural and content diversity of mitochondrial genome in beet: a comparative genomic analysis
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3163473/
https://www.ncbi.nlm.nih.gov/pubmed/21602571
http://dx.doi.org/10.1093/gbe/evr042
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