Querying large read collections in main memory: a versatile data structure

BACKGROUND: High Throughput Sequencing (HTS) is now heavily exploited for genome (re-) sequencing, metagenomics, epigenomics, and transcriptomics and requires different, but computer intensive bioinformatic analyses. When a reference genome is available, mapping reads on it is the first step of this...

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Detalles Bibliográficos
Autores principales: Philippe, Nicolas, Salson, Mikaël, Lecroq, Thierry, Léonard, Martine, Commes, Thérèse, Rivals, Eric
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2011
Materias:
Methodology Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3163563/
https://www.ncbi.nlm.nih.gov/pubmed/21682852
http://dx.doi.org/10.1186/1471-2105-12-242

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3163563/
https://www.ncbi.nlm.nih.gov/pubmed/21682852
http://dx.doi.org/10.1186/1471-2105-12-242

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