Mycobacteriophage Genome Database

Mycobacteriophage genome database (MGDB) is an exclusive repository of the 64 completely sequenced mycobacteriophages with annotated information. It is a comprehensive compilation of the various gene parameters captured from several databases pooled together to empower mycobacteriophage researchers....

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Detalles Bibliográficos
Autores principales: Joseph, Jerrine, Rajendran, Vasanthi, Hassan, Sameer, Kumar, Vanaja
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2011
Materias:
Database
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3163920/
https://www.ncbi.nlm.nih.gov/pubmed/21904429
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author Joseph, Jerrine
Rajendran, Vasanthi
Hassan, Sameer
Kumar, Vanaja
author_facet Joseph, Jerrine
Rajendran, Vasanthi
Hassan, Sameer
Kumar, Vanaja
author_sort Joseph, Jerrine
collection PubMed
description Mycobacteriophage genome database (MGDB) is an exclusive repository of the 64 completely sequenced mycobacteriophages with annotated information. It is a comprehensive compilation of the various gene parameters captured from several databases pooled together to empower mycobacteriophage researchers. The MGDB (Version No.1.0) comprises of 6086 genes from 64 mycobacteriophages classified into 72 families based on ACLAME database. Manual curation was aided by information available from public databases which was enriched further by analysis. Its web interface allows browsing as well as querying the classification. The main objective is to collect and organize the complexity inherent to mycobacteriophage protein classification in a rational way. The other objective is to browse the existing and new genomes and describe their functional annotation. AVAILABILITY: The database is available for free at http://mpgdb.ibioinformatics.org/mpgdb.php
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spelling pubmed-31639202011-09-08 Mycobacteriophage Genome Database Joseph, Jerrine Rajendran, Vasanthi Hassan, Sameer Kumar, Vanaja Bioinformation Database Mycobacteriophage genome database (MGDB) is an exclusive repository of the 64 completely sequenced mycobacteriophages with annotated information. It is a comprehensive compilation of the various gene parameters captured from several databases pooled together to empower mycobacteriophage researchers. The MGDB (Version No.1.0) comprises of 6086 genes from 64 mycobacteriophages classified into 72 families based on ACLAME database. Manual curation was aided by information available from public databases which was enriched further by analysis. Its web interface allows browsing as well as querying the classification. The main objective is to collect and organize the complexity inherent to mycobacteriophage protein classification in a rational way. The other objective is to browse the existing and new genomes and describe their functional annotation. AVAILABILITY: The database is available for free at http://mpgdb.ibioinformatics.org/mpgdb.php Biomedical Informatics 2011-08-02 /pmc/articles/PMC3163920/ /pubmed/21904429 Text en © 2011 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Database
Joseph, Jerrine
Rajendran, Vasanthi
Hassan, Sameer
Kumar, Vanaja
Mycobacteriophage Genome Database
title Mycobacteriophage Genome Database
title_full Mycobacteriophage Genome Database
title_fullStr Mycobacteriophage Genome Database
title_full_unstemmed Mycobacteriophage Genome Database
title_short Mycobacteriophage Genome Database
title_sort mycobacteriophage genome database
topic Database
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3163920/
https://www.ncbi.nlm.nih.gov/pubmed/21904429
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AT rajendranvasanthi mycobacteriophagegenomedatabase
AT hassansameer mycobacteriophagegenomedatabase
AT kumarvanaja mycobacteriophagegenomedatabase

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