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Structure of fructose bisphosphate aldolase from Bartonella henselae bound to fructose 1,6-bisphosphate
Fructose bisphosphate aldolase (FBPA) enzymes have been found in a broad range of eukaryotic and prokaryotic organisms. FBPA catalyses the cleavage of fructose 1,6-bisphosphate into glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The SSGCID has reported several FBPA structures from patho...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2011
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3169401/ https://www.ncbi.nlm.nih.gov/pubmed/21904049 http://dx.doi.org/10.1107/S174430911101894X |
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author | Gardberg, Anna Abendroth, Jan Bhandari, Janhavi Sankaran, Banumathi Staker, Bart |
author_facet | Gardberg, Anna Abendroth, Jan Bhandari, Janhavi Sankaran, Banumathi Staker, Bart |
author_sort | Gardberg, Anna |
collection | PubMed |
description | Fructose bisphosphate aldolase (FBPA) enzymes have been found in a broad range of eukaryotic and prokaryotic organisms. FBPA catalyses the cleavage of fructose 1,6-bisphosphate into glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The SSGCID has reported several FBPA structures from pathogenic sources, including the bacterium Brucella melitensis and the protozoan Babesia bovis. Bioinformatic analysis of the Bartonella henselae genome revealed an FBPA homolog. The B. henselae FBPA enzyme was recombinantly expressed and purified for X-ray crystallographic studies. The purified enzyme crystallized in the apo form but failed to diffract; however, well diffracting crystals could be obtained by cocrystallization in the presence of the native substrate fructose 1,6-bisphosphate. A data set to 2.35 Å resolution was collected from a single crystal at 100 K. The crystal belonged to the orthorhombic space group P2(1)2(1)2(1), with unit-cell parameters a = 72.39, b = 127.71, c = 157.63 Å. The structure was refined to a final free R factor of 22.2%. The structure shares the typical barrel tertiary structure and tetrameric quaternary structure reported for previous FBPA structures and exhibits the same Schiff base in the active site. |
format | Online Article Text |
id | pubmed-3169401 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-31694012011-09-21 Structure of fructose bisphosphate aldolase from Bartonella henselae bound to fructose 1,6-bisphosphate Gardberg, Anna Abendroth, Jan Bhandari, Janhavi Sankaran, Banumathi Staker, Bart Acta Crystallogr Sect F Struct Biol Cryst Commun Structural Communications Fructose bisphosphate aldolase (FBPA) enzymes have been found in a broad range of eukaryotic and prokaryotic organisms. FBPA catalyses the cleavage of fructose 1,6-bisphosphate into glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The SSGCID has reported several FBPA structures from pathogenic sources, including the bacterium Brucella melitensis and the protozoan Babesia bovis. Bioinformatic analysis of the Bartonella henselae genome revealed an FBPA homolog. The B. henselae FBPA enzyme was recombinantly expressed and purified for X-ray crystallographic studies. The purified enzyme crystallized in the apo form but failed to diffract; however, well diffracting crystals could be obtained by cocrystallization in the presence of the native substrate fructose 1,6-bisphosphate. A data set to 2.35 Å resolution was collected from a single crystal at 100 K. The crystal belonged to the orthorhombic space group P2(1)2(1)2(1), with unit-cell parameters a = 72.39, b = 127.71, c = 157.63 Å. The structure was refined to a final free R factor of 22.2%. The structure shares the typical barrel tertiary structure and tetrameric quaternary structure reported for previous FBPA structures and exhibits the same Schiff base in the active site. International Union of Crystallography 2011-08-13 /pmc/articles/PMC3169401/ /pubmed/21904049 http://dx.doi.org/10.1107/S174430911101894X Text en © Gardberg et al. 2011 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Structural Communications Gardberg, Anna Abendroth, Jan Bhandari, Janhavi Sankaran, Banumathi Staker, Bart Structure of fructose bisphosphate aldolase from Bartonella henselae bound to fructose 1,6-bisphosphate |
title | Structure of fructose bisphosphate aldolase from Bartonella henselae bound to fructose 1,6-bisphosphate |
title_full | Structure of fructose bisphosphate aldolase from Bartonella henselae bound to fructose 1,6-bisphosphate |
title_fullStr | Structure of fructose bisphosphate aldolase from Bartonella henselae bound to fructose 1,6-bisphosphate |
title_full_unstemmed | Structure of fructose bisphosphate aldolase from Bartonella henselae bound to fructose 1,6-bisphosphate |
title_short | Structure of fructose bisphosphate aldolase from Bartonella henselae bound to fructose 1,6-bisphosphate |
title_sort | structure of fructose bisphosphate aldolase from bartonella henselae bound to fructose 1,6-bisphosphate |
topic | Structural Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3169401/ https://www.ncbi.nlm.nih.gov/pubmed/21904049 http://dx.doi.org/10.1107/S174430911101894X |
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