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Automated measurement of Drosophila wings

BACKGROUND: Many studies in evolutionary biology and genetics are limited by the rate at which phenotypic information can be acquired. The wings of Drosophila species are a favorable target for automated analysis because of the many interesting questions in evolution and development that can be addr...

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Autores principales: Houle, David, Mezey, Jason, Galpern, Paul, Carter, Ashley
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2003
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC317280/
https://www.ncbi.nlm.nih.gov/pubmed/14670094
http://dx.doi.org/10.1186/1471-2148-3-25
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author Houle, David
Mezey, Jason
Galpern, Paul
Carter, Ashley
author_facet Houle, David
Mezey, Jason
Galpern, Paul
Carter, Ashley
author_sort Houle, David
collection PubMed
description BACKGROUND: Many studies in evolutionary biology and genetics are limited by the rate at which phenotypic information can be acquired. The wings of Drosophila species are a favorable target for automated analysis because of the many interesting questions in evolution and development that can be addressed with them, and because of their simple structure. RESULTS: We have developed an automated image analysis system (WINGMACHINE) that measures the positions of all the veins and the edges of the wing blade of Drosophilid flies. A video image is obtained with the aid of a simple suction device that immobilizes the wing of a live fly. Low-level processing is used to find the major intersections of the veins. High-level processing then optimizes the fit of an a priori B-spline model of wing shape. WINGMACHINE allows the measurement of 1 wing per minute, including handling, imaging, analysis, and data editing. The repeatabilities of 12 vein intersections averaged 86% in a sample of flies of the same species and sex. Comparison of 2400 wings of 25 Drosophilid species shows that wing shape is quite conservative within the group, but that almost all taxa are diagnosably different from one another. Wing shape retains some phylogenetic structure, although some species have shapes very different from closely related species. The WINGMACHINE system facilitates artificial selection experiments on complex aspects of wing shape. We selected on an index which is a function of 14 separate measurements of each wing. After 14 generations, we achieved a 15 S.D. difference between up and down-selected treatments. CONCLUSION: WINGMACHINE enables rapid, highly repeatable measurements of wings in the family Drosophilidae. Our approach to image analysis may be applicable to a variety of biological objects that can be represented as a framework of connected lines.
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spelling pubmed-3172802004-01-26 Automated measurement of Drosophila wings Houle, David Mezey, Jason Galpern, Paul Carter, Ashley BMC Evol Biol Methodology Article BACKGROUND: Many studies in evolutionary biology and genetics are limited by the rate at which phenotypic information can be acquired. The wings of Drosophila species are a favorable target for automated analysis because of the many interesting questions in evolution and development that can be addressed with them, and because of their simple structure. RESULTS: We have developed an automated image analysis system (WINGMACHINE) that measures the positions of all the veins and the edges of the wing blade of Drosophilid flies. A video image is obtained with the aid of a simple suction device that immobilizes the wing of a live fly. Low-level processing is used to find the major intersections of the veins. High-level processing then optimizes the fit of an a priori B-spline model of wing shape. WINGMACHINE allows the measurement of 1 wing per minute, including handling, imaging, analysis, and data editing. The repeatabilities of 12 vein intersections averaged 86% in a sample of flies of the same species and sex. Comparison of 2400 wings of 25 Drosophilid species shows that wing shape is quite conservative within the group, but that almost all taxa are diagnosably different from one another. Wing shape retains some phylogenetic structure, although some species have shapes very different from closely related species. The WINGMACHINE system facilitates artificial selection experiments on complex aspects of wing shape. We selected on an index which is a function of 14 separate measurements of each wing. After 14 generations, we achieved a 15 S.D. difference between up and down-selected treatments. CONCLUSION: WINGMACHINE enables rapid, highly repeatable measurements of wings in the family Drosophilidae. Our approach to image analysis may be applicable to a variety of biological objects that can be represented as a framework of connected lines. BioMed Central 2003-12-11 /pmc/articles/PMC317280/ /pubmed/14670094 http://dx.doi.org/10.1186/1471-2148-3-25 Text en Copyright © 2003 Houle et al; licensee BioMed Central Ltd. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose, provided this notice is preserved along with the article's original URL.
spellingShingle Methodology Article
Houle, David
Mezey, Jason
Galpern, Paul
Carter, Ashley
Automated measurement of Drosophila wings
title Automated measurement of Drosophila wings
title_full Automated measurement of Drosophila wings
title_fullStr Automated measurement of Drosophila wings
title_full_unstemmed Automated measurement of Drosophila wings
title_short Automated measurement of Drosophila wings
title_sort automated measurement of drosophila wings
topic Methodology Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC317280/
https://www.ncbi.nlm.nih.gov/pubmed/14670094
http://dx.doi.org/10.1186/1471-2148-3-25
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