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Flexible epidemiological model for estimates and short-term projections in generalised HIV/AIDS epidemics

OBJECTIVE: UNAIDS and country analysts use a simple infectious disease model, embedded in the Estimation and Projection Package (EPP), to generate annual updates on the global HIV/AIDS epidemic. Our objective was to develop modifications to the current model that improve fit to recently observed pre...

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Autores principales: Hogan, Daniel R, Zaslavsky, Alan M, Hammitt, James K, Salomon, Joshua A
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BMJ Group 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3173822/
https://www.ncbi.nlm.nih.gov/pubmed/21106520
http://dx.doi.org/10.1136/sti.2010.045104
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author Hogan, Daniel R
Zaslavsky, Alan M
Hammitt, James K
Salomon, Joshua A
author_facet Hogan, Daniel R
Zaslavsky, Alan M
Hammitt, James K
Salomon, Joshua A
author_sort Hogan, Daniel R
collection PubMed
description OBJECTIVE: UNAIDS and country analysts use a simple infectious disease model, embedded in the Estimation and Projection Package (EPP), to generate annual updates on the global HIV/AIDS epidemic. Our objective was to develop modifications to the current model that improve fit to recently observed prevalence trends across countries. METHODS: Our proposed alternative to the current EPP approach simplifies the model structure and explicitly models changes in average infection risk over time, operationalised using penalised B-splines in a Bayesian framework. We also present an alternative approach to initiating the epidemic that improves standardisation and efficiency, and add an informative prior distribution for changes in infection risk beyond the last data point that enhances the plausibility of short-term extrapolations. RESULTS: The spline-based model produces better fits than the current model to observed prevalence trends in settings that have recently experienced levelling or rising prevalence following a steep decline, such as Uganda and urban Rwanda. The model also predicts a deceleration of the decline in prevalence for countries with recent experience of steady declines, such as Kenya and Zimbabwe. Estimates and projections from our alternative model are comparable to those from the current model where the latter performs well. CONCLUSIONS: A more flexible epidemiological model that accommodates changing infection risk over time can provide better estimates and short-term projections of HIV/AIDS incidence, prevalence and mortality than the current EPP model. The alternative model specification can be incorporated easily into existing analytical tools that are used to produce updates on the global HIV/AIDS epidemic.
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spelling pubmed-31738222011-09-23 Flexible epidemiological model for estimates and short-term projections in generalised HIV/AIDS epidemics Hogan, Daniel R Zaslavsky, Alan M Hammitt, James K Salomon, Joshua A Sex Transm Infect Supplement OBJECTIVE: UNAIDS and country analysts use a simple infectious disease model, embedded in the Estimation and Projection Package (EPP), to generate annual updates on the global HIV/AIDS epidemic. Our objective was to develop modifications to the current model that improve fit to recently observed prevalence trends across countries. METHODS: Our proposed alternative to the current EPP approach simplifies the model structure and explicitly models changes in average infection risk over time, operationalised using penalised B-splines in a Bayesian framework. We also present an alternative approach to initiating the epidemic that improves standardisation and efficiency, and add an informative prior distribution for changes in infection risk beyond the last data point that enhances the plausibility of short-term extrapolations. RESULTS: The spline-based model produces better fits than the current model to observed prevalence trends in settings that have recently experienced levelling or rising prevalence following a steep decline, such as Uganda and urban Rwanda. The model also predicts a deceleration of the decline in prevalence for countries with recent experience of steady declines, such as Kenya and Zimbabwe. Estimates and projections from our alternative model are comparable to those from the current model where the latter performs well. CONCLUSIONS: A more flexible epidemiological model that accommodates changing infection risk over time can provide better estimates and short-term projections of HIV/AIDS incidence, prevalence and mortality than the current EPP model. The alternative model specification can be incorporated easily into existing analytical tools that are used to produce updates on the global HIV/AIDS epidemic. BMJ Group 2010-11-23 2010-12 /pmc/articles/PMC3173822/ /pubmed/21106520 http://dx.doi.org/10.1136/sti.2010.045104 Text en © 2010, Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions. This is an open-access article distributed under the terms of the Creative Commons Attribution Non-commercial License, which permits use, distribution, and reproduction in any medium, provided the original work is properly cited, the use is non commercial and is otherwise in compliance with the license. See: http://creativecommons.org/licenses/by-nc/2.0/ and http://creativecommons.org/licenses/by-nc/2.0/legalcode.
spellingShingle Supplement
Hogan, Daniel R
Zaslavsky, Alan M
Hammitt, James K
Salomon, Joshua A
Flexible epidemiological model for estimates and short-term projections in generalised HIV/AIDS epidemics
title Flexible epidemiological model for estimates and short-term projections in generalised HIV/AIDS epidemics
title_full Flexible epidemiological model for estimates and short-term projections in generalised HIV/AIDS epidemics
title_fullStr Flexible epidemiological model for estimates and short-term projections in generalised HIV/AIDS epidemics
title_full_unstemmed Flexible epidemiological model for estimates and short-term projections in generalised HIV/AIDS epidemics
title_short Flexible epidemiological model for estimates and short-term projections in generalised HIV/AIDS epidemics
title_sort flexible epidemiological model for estimates and short-term projections in generalised hiv/aids epidemics
topic Supplement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3173822/
https://www.ncbi.nlm.nih.gov/pubmed/21106520
http://dx.doi.org/10.1136/sti.2010.045104
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