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Genetic Architecture of Growth Traits Revealed by Global Epistatic Interactions

Epistasis has long been recognized as fundamentally important in understanding the structure, function, and evolutionary dynamics of biological systems. Yet, little is known about how it is distributed underlying specific traits. Based on a global map of epistatic interactions in baker's yeast,...

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Detalles Bibliográficos
Autores principales: Xu, Lin, Jiang, Huifeng, Chen, Hong, Gu, Zhenglong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3177326/
https://www.ncbi.nlm.nih.gov/pubmed/21859803
http://dx.doi.org/10.1093/gbe/evr065
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author Xu, Lin
Jiang, Huifeng
Chen, Hong
Gu, Zhenglong
author_facet Xu, Lin
Jiang, Huifeng
Chen, Hong
Gu, Zhenglong
author_sort Xu, Lin
collection PubMed
description Epistasis has long been recognized as fundamentally important in understanding the structure, function, and evolutionary dynamics of biological systems. Yet, little is known about how it is distributed underlying specific traits. Based on a global map of epistatic interactions in baker's yeast, Saccharomyces cerevisiae, we show that epistasis is prevalent (∼13% increase from random expectation) and displays modular architecture among genes that underlie the same growth traits. More interestingly, our results indicate that hub genes responsible for the same growth traits tend to link epistatically with each other more frequently than random expectation. Our results provide a genome-wide perspective on the genetic architecture of growth traits in a eukaryotic organism.
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spelling pubmed-31773262011-09-21 Genetic Architecture of Growth Traits Revealed by Global Epistatic Interactions Xu, Lin Jiang, Huifeng Chen, Hong Gu, Zhenglong Genome Biol Evol Letters Epistasis has long been recognized as fundamentally important in understanding the structure, function, and evolutionary dynamics of biological systems. Yet, little is known about how it is distributed underlying specific traits. Based on a global map of epistatic interactions in baker's yeast, Saccharomyces cerevisiae, we show that epistasis is prevalent (∼13% increase from random expectation) and displays modular architecture among genes that underlie the same growth traits. More interestingly, our results indicate that hub genes responsible for the same growth traits tend to link epistatically with each other more frequently than random expectation. Our results provide a genome-wide perspective on the genetic architecture of growth traits in a eukaryotic organism. Oxford University Press 2011-08-22 /pmc/articles/PMC3177326/ /pubmed/21859803 http://dx.doi.org/10.1093/gbe/evr065 Text en © The Author(s) 2011. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Letters
Xu, Lin
Jiang, Huifeng
Chen, Hong
Gu, Zhenglong
Genetic Architecture of Growth Traits Revealed by Global Epistatic Interactions
title Genetic Architecture of Growth Traits Revealed by Global Epistatic Interactions
title_full Genetic Architecture of Growth Traits Revealed by Global Epistatic Interactions
title_fullStr Genetic Architecture of Growth Traits Revealed by Global Epistatic Interactions
title_full_unstemmed Genetic Architecture of Growth Traits Revealed by Global Epistatic Interactions
title_short Genetic Architecture of Growth Traits Revealed by Global Epistatic Interactions
title_sort genetic architecture of growth traits revealed by global epistatic interactions
topic Letters
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3177326/
https://www.ncbi.nlm.nih.gov/pubmed/21859803
http://dx.doi.org/10.1093/gbe/evr065
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