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Genetic Architecture of Growth Traits Revealed by Global Epistatic Interactions
Epistasis has long been recognized as fundamentally important in understanding the structure, function, and evolutionary dynamics of biological systems. Yet, little is known about how it is distributed underlying specific traits. Based on a global map of epistatic interactions in baker's yeast,...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3177326/ https://www.ncbi.nlm.nih.gov/pubmed/21859803 http://dx.doi.org/10.1093/gbe/evr065 |
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author | Xu, Lin Jiang, Huifeng Chen, Hong Gu, Zhenglong |
author_facet | Xu, Lin Jiang, Huifeng Chen, Hong Gu, Zhenglong |
author_sort | Xu, Lin |
collection | PubMed |
description | Epistasis has long been recognized as fundamentally important in understanding the structure, function, and evolutionary dynamics of biological systems. Yet, little is known about how it is distributed underlying specific traits. Based on a global map of epistatic interactions in baker's yeast, Saccharomyces cerevisiae, we show that epistasis is prevalent (∼13% increase from random expectation) and displays modular architecture among genes that underlie the same growth traits. More interestingly, our results indicate that hub genes responsible for the same growth traits tend to link epistatically with each other more frequently than random expectation. Our results provide a genome-wide perspective on the genetic architecture of growth traits in a eukaryotic organism. |
format | Online Article Text |
id | pubmed-3177326 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-31773262011-09-21 Genetic Architecture of Growth Traits Revealed by Global Epistatic Interactions Xu, Lin Jiang, Huifeng Chen, Hong Gu, Zhenglong Genome Biol Evol Letters Epistasis has long been recognized as fundamentally important in understanding the structure, function, and evolutionary dynamics of biological systems. Yet, little is known about how it is distributed underlying specific traits. Based on a global map of epistatic interactions in baker's yeast, Saccharomyces cerevisiae, we show that epistasis is prevalent (∼13% increase from random expectation) and displays modular architecture among genes that underlie the same growth traits. More interestingly, our results indicate that hub genes responsible for the same growth traits tend to link epistatically with each other more frequently than random expectation. Our results provide a genome-wide perspective on the genetic architecture of growth traits in a eukaryotic organism. Oxford University Press 2011-08-22 /pmc/articles/PMC3177326/ /pubmed/21859803 http://dx.doi.org/10.1093/gbe/evr065 Text en © The Author(s) 2011. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Letters Xu, Lin Jiang, Huifeng Chen, Hong Gu, Zhenglong Genetic Architecture of Growth Traits Revealed by Global Epistatic Interactions |
title | Genetic Architecture of Growth Traits Revealed by Global Epistatic Interactions |
title_full | Genetic Architecture of Growth Traits Revealed by Global Epistatic Interactions |
title_fullStr | Genetic Architecture of Growth Traits Revealed by Global Epistatic Interactions |
title_full_unstemmed | Genetic Architecture of Growth Traits Revealed by Global Epistatic Interactions |
title_short | Genetic Architecture of Growth Traits Revealed by Global Epistatic Interactions |
title_sort | genetic architecture of growth traits revealed by global epistatic interactions |
topic | Letters |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3177326/ https://www.ncbi.nlm.nih.gov/pubmed/21859803 http://dx.doi.org/10.1093/gbe/evr065 |
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