Conceptual framework and pilot study to benchmark phylogenomic databases based on reference gene trees

Phylogenomic databases provide orthology predictions for species with fully sequenced genomes. Although the goal seems well-defined, the content of these databases differs greatly. Seven ortholog databases (Ensembl Compara, eggNOG, HOGENOM, InParanoid, OMA, OrthoDB, Panther) were compared on the bas...

Descripción completa

Detalles Bibliográficos
Autores principales: Boeckmann, Brigitte, Robinson-Rechavi, Marc, Xenarios, Ioannis, Dessimoz, Christophe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Special Issue Papers
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3178055/
https://www.ncbi.nlm.nih.gov/pubmed/21737420
http://dx.doi.org/10.1093/bib/bbr034

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3178055/
https://www.ncbi.nlm.nih.gov/pubmed/21737420
http://dx.doi.org/10.1093/bib/bbr034

Ejemplares similares