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Conceptual framework and pilot study to benchmark phylogenomic databases based on reference gene trees
Phylogenomic databases provide orthology predictions for species with fully sequenced genomes. Although the goal seems well-defined, the content of these databases differs greatly. Seven ortholog databases (Ensembl Compara, eggNOG, HOGENOM, InParanoid, OMA, OrthoDB, Panther) were compared on the bas...
Autores principales: | Boeckmann, Brigitte, Robinson-Rechavi, Marc, Xenarios, Ioannis, Dessimoz, Christophe |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3178055/ https://www.ncbi.nlm.nih.gov/pubmed/21737420 http://dx.doi.org/10.1093/bib/bbr034 |
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