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Integrating GPCR-specific information with full text articles

BACKGROUND: With the continued growth in the volume both of experimental G protein-coupled receptor (GPCR) data and of the related peer-reviewed literature, the ability of GPCR researchers to keep up-to-date is becoming increasingly curtailed. RESULTS: We present work that integrates the biological...

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Autores principales: Vroling, Bas, Thorne, David, McDermott, Philip, Attwood, Teresa K, Vriend, Gert, Pettifer, Steve
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3179973/
https://www.ncbi.nlm.nih.gov/pubmed/21910883
http://dx.doi.org/10.1186/1471-2105-12-362
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author Vroling, Bas
Thorne, David
McDermott, Philip
Attwood, Teresa K
Vriend, Gert
Pettifer, Steve
author_facet Vroling, Bas
Thorne, David
McDermott, Philip
Attwood, Teresa K
Vriend, Gert
Pettifer, Steve
author_sort Vroling, Bas
collection PubMed
description BACKGROUND: With the continued growth in the volume both of experimental G protein-coupled receptor (GPCR) data and of the related peer-reviewed literature, the ability of GPCR researchers to keep up-to-date is becoming increasingly curtailed. RESULTS: We present work that integrates the biological data and annotations in the GPCR information system (GPCRDB) with next-generation methods for intelligently exploring, visualising and interacting with the scientific articles used to disseminate them. This solution automatically retrieves relevant information from GPCRDB and displays it both within and as an adjunct to an article. CONCLUSIONS: This approach allows researchers to extract more knowledge more swiftly from literature. Importantly, it allows reinterpretation of data in articles published before GPCR structure data became widely available, thereby rescuing these valuable data from long-dormant sources.
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spelling pubmed-31799732011-09-26 Integrating GPCR-specific information with full text articles Vroling, Bas Thorne, David McDermott, Philip Attwood, Teresa K Vriend, Gert Pettifer, Steve BMC Bioinformatics Software BACKGROUND: With the continued growth in the volume both of experimental G protein-coupled receptor (GPCR) data and of the related peer-reviewed literature, the ability of GPCR researchers to keep up-to-date is becoming increasingly curtailed. RESULTS: We present work that integrates the biological data and annotations in the GPCR information system (GPCRDB) with next-generation methods for intelligently exploring, visualising and interacting with the scientific articles used to disseminate them. This solution automatically retrieves relevant information from GPCRDB and displays it both within and as an adjunct to an article. CONCLUSIONS: This approach allows researchers to extract more knowledge more swiftly from literature. Importantly, it allows reinterpretation of data in articles published before GPCR structure data became widely available, thereby rescuing these valuable data from long-dormant sources. BioMed Central 2011-09-12 /pmc/articles/PMC3179973/ /pubmed/21910883 http://dx.doi.org/10.1186/1471-2105-12-362 Text en Copyright © 2011 Vroling et al; licensee BioMed Central Ltd. https://creativecommons.org/licenses/by/2.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0 (https://creativecommons.org/licenses/by/2.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Software
Vroling, Bas
Thorne, David
McDermott, Philip
Attwood, Teresa K
Vriend, Gert
Pettifer, Steve
Integrating GPCR-specific information with full text articles
title Integrating GPCR-specific information with full text articles
title_full Integrating GPCR-specific information with full text articles
title_fullStr Integrating GPCR-specific information with full text articles
title_full_unstemmed Integrating GPCR-specific information with full text articles
title_short Integrating GPCR-specific information with full text articles
title_sort integrating gpcr-specific information with full text articles
topic Software
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3179973/
https://www.ncbi.nlm.nih.gov/pubmed/21910883
http://dx.doi.org/10.1186/1471-2105-12-362
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