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A Time-Series Method for Automated Measurement of Changes in Mitotic and Interphase Duration from Time-Lapse Movies
BACKGROUND: Automated time-lapse microscopy can visualize proliferation of large numbers of individual cells, enabling accurate measurement of the frequency of cell division and the duration of interphase and mitosis. However, extraction of quantitative information by manual inspection of time-lapse...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3180452/ https://www.ncbi.nlm.nih.gov/pubmed/21966537 http://dx.doi.org/10.1371/journal.pone.0025511 |
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author | Sigoillot, Frederic D. Huckins, Jeremy F. Li, Fuhai Zhou, Xiaobo Wong, Stephen T. C. King, Randall W. |
author_facet | Sigoillot, Frederic D. Huckins, Jeremy F. Li, Fuhai Zhou, Xiaobo Wong, Stephen T. C. King, Randall W. |
author_sort | Sigoillot, Frederic D. |
collection | PubMed |
description | BACKGROUND: Automated time-lapse microscopy can visualize proliferation of large numbers of individual cells, enabling accurate measurement of the frequency of cell division and the duration of interphase and mitosis. However, extraction of quantitative information by manual inspection of time-lapse movies is too time-consuming to be useful for analysis of large experiments. METHODOLOGY/PRINCIPAL FINDINGS: Here we present an automated time-series approach that can measure changes in the duration of mitosis and interphase in individual cells expressing fluorescent histone 2B. The approach requires analysis of only 2 features, nuclear area and average intensity. Compared to supervised learning approaches, this method reduces processing time and does not require generation of training data sets. We demonstrate that this method is as sensitive as manual analysis in identifying small changes in interphase or mitotic duration induced by drug or siRNA treatment. CONCLUSIONS/SIGNIFICANCE: This approach should facilitate automated analysis of high-throughput time-lapse data sets to identify small molecules or gene products that influence timing of cell division. |
format | Online Article Text |
id | pubmed-3180452 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-31804522011-09-30 A Time-Series Method for Automated Measurement of Changes in Mitotic and Interphase Duration from Time-Lapse Movies Sigoillot, Frederic D. Huckins, Jeremy F. Li, Fuhai Zhou, Xiaobo Wong, Stephen T. C. King, Randall W. PLoS One Research Article BACKGROUND: Automated time-lapse microscopy can visualize proliferation of large numbers of individual cells, enabling accurate measurement of the frequency of cell division and the duration of interphase and mitosis. However, extraction of quantitative information by manual inspection of time-lapse movies is too time-consuming to be useful for analysis of large experiments. METHODOLOGY/PRINCIPAL FINDINGS: Here we present an automated time-series approach that can measure changes in the duration of mitosis and interphase in individual cells expressing fluorescent histone 2B. The approach requires analysis of only 2 features, nuclear area and average intensity. Compared to supervised learning approaches, this method reduces processing time and does not require generation of training data sets. We demonstrate that this method is as sensitive as manual analysis in identifying small changes in interphase or mitotic duration induced by drug or siRNA treatment. CONCLUSIONS/SIGNIFICANCE: This approach should facilitate automated analysis of high-throughput time-lapse data sets to identify small molecules or gene products that influence timing of cell division. Public Library of Science 2011-09-26 /pmc/articles/PMC3180452/ /pubmed/21966537 http://dx.doi.org/10.1371/journal.pone.0025511 Text en Sigoillot et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Sigoillot, Frederic D. Huckins, Jeremy F. Li, Fuhai Zhou, Xiaobo Wong, Stephen T. C. King, Randall W. A Time-Series Method for Automated Measurement of Changes in Mitotic and Interphase Duration from Time-Lapse Movies |
title | A Time-Series Method for Automated Measurement of Changes in Mitotic and Interphase Duration from Time-Lapse Movies |
title_full | A Time-Series Method for Automated Measurement of Changes in Mitotic and Interphase Duration from Time-Lapse Movies |
title_fullStr | A Time-Series Method for Automated Measurement of Changes in Mitotic and Interphase Duration from Time-Lapse Movies |
title_full_unstemmed | A Time-Series Method for Automated Measurement of Changes in Mitotic and Interphase Duration from Time-Lapse Movies |
title_short | A Time-Series Method for Automated Measurement of Changes in Mitotic and Interphase Duration from Time-Lapse Movies |
title_sort | time-series method for automated measurement of changes in mitotic and interphase duration from time-lapse movies |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3180452/ https://www.ncbi.nlm.nih.gov/pubmed/21966537 http://dx.doi.org/10.1371/journal.pone.0025511 |
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