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A Time-Series Method for Automated Measurement of Changes in Mitotic and Interphase Duration from Time-Lapse Movies

BACKGROUND: Automated time-lapse microscopy can visualize proliferation of large numbers of individual cells, enabling accurate measurement of the frequency of cell division and the duration of interphase and mitosis. However, extraction of quantitative information by manual inspection of time-lapse...

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Autores principales: Sigoillot, Frederic D., Huckins, Jeremy F., Li, Fuhai, Zhou, Xiaobo, Wong, Stephen T. C., King, Randall W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3180452/
https://www.ncbi.nlm.nih.gov/pubmed/21966537
http://dx.doi.org/10.1371/journal.pone.0025511
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author Sigoillot, Frederic D.
Huckins, Jeremy F.
Li, Fuhai
Zhou, Xiaobo
Wong, Stephen T. C.
King, Randall W.
author_facet Sigoillot, Frederic D.
Huckins, Jeremy F.
Li, Fuhai
Zhou, Xiaobo
Wong, Stephen T. C.
King, Randall W.
author_sort Sigoillot, Frederic D.
collection PubMed
description BACKGROUND: Automated time-lapse microscopy can visualize proliferation of large numbers of individual cells, enabling accurate measurement of the frequency of cell division and the duration of interphase and mitosis. However, extraction of quantitative information by manual inspection of time-lapse movies is too time-consuming to be useful for analysis of large experiments. METHODOLOGY/PRINCIPAL FINDINGS: Here we present an automated time-series approach that can measure changes in the duration of mitosis and interphase in individual cells expressing fluorescent histone 2B. The approach requires analysis of only 2 features, nuclear area and average intensity. Compared to supervised learning approaches, this method reduces processing time and does not require generation of training data sets. We demonstrate that this method is as sensitive as manual analysis in identifying small changes in interphase or mitotic duration induced by drug or siRNA treatment. CONCLUSIONS/SIGNIFICANCE: This approach should facilitate automated analysis of high-throughput time-lapse data sets to identify small molecules or gene products that influence timing of cell division.
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spelling pubmed-31804522011-09-30 A Time-Series Method for Automated Measurement of Changes in Mitotic and Interphase Duration from Time-Lapse Movies Sigoillot, Frederic D. Huckins, Jeremy F. Li, Fuhai Zhou, Xiaobo Wong, Stephen T. C. King, Randall W. PLoS One Research Article BACKGROUND: Automated time-lapse microscopy can visualize proliferation of large numbers of individual cells, enabling accurate measurement of the frequency of cell division and the duration of interphase and mitosis. However, extraction of quantitative information by manual inspection of time-lapse movies is too time-consuming to be useful for analysis of large experiments. METHODOLOGY/PRINCIPAL FINDINGS: Here we present an automated time-series approach that can measure changes in the duration of mitosis and interphase in individual cells expressing fluorescent histone 2B. The approach requires analysis of only 2 features, nuclear area and average intensity. Compared to supervised learning approaches, this method reduces processing time and does not require generation of training data sets. We demonstrate that this method is as sensitive as manual analysis in identifying small changes in interphase or mitotic duration induced by drug or siRNA treatment. CONCLUSIONS/SIGNIFICANCE: This approach should facilitate automated analysis of high-throughput time-lapse data sets to identify small molecules or gene products that influence timing of cell division. Public Library of Science 2011-09-26 /pmc/articles/PMC3180452/ /pubmed/21966537 http://dx.doi.org/10.1371/journal.pone.0025511 Text en Sigoillot et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Sigoillot, Frederic D.
Huckins, Jeremy F.
Li, Fuhai
Zhou, Xiaobo
Wong, Stephen T. C.
King, Randall W.
A Time-Series Method for Automated Measurement of Changes in Mitotic and Interphase Duration from Time-Lapse Movies
title A Time-Series Method for Automated Measurement of Changes in Mitotic and Interphase Duration from Time-Lapse Movies
title_full A Time-Series Method for Automated Measurement of Changes in Mitotic and Interphase Duration from Time-Lapse Movies
title_fullStr A Time-Series Method for Automated Measurement of Changes in Mitotic and Interphase Duration from Time-Lapse Movies
title_full_unstemmed A Time-Series Method for Automated Measurement of Changes in Mitotic and Interphase Duration from Time-Lapse Movies
title_short A Time-Series Method for Automated Measurement of Changes in Mitotic and Interphase Duration from Time-Lapse Movies
title_sort time-series method for automated measurement of changes in mitotic and interphase duration from time-lapse movies
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3180452/
https://www.ncbi.nlm.nih.gov/pubmed/21966537
http://dx.doi.org/10.1371/journal.pone.0025511
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