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Longitudinal exchange: an alternative strategy towards quantification of dynamics parameters in ZZ exchange spectroscopy

Longitudinal exchange experiments facilitate the quantification of the rates of interconversion between the exchanging species, along with their longitudinal relaxation rates, by analyzing the time-dependence of direct correlation and exchange cross peaks. Here we present a simple and robust alterna...

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Autores principales: Kloiber, Karin, Spitzer, Romana, Grutsch, Sarina, Kreutz, Christoph, Tollinger, Martin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3180593/
https://www.ncbi.nlm.nih.gov/pubmed/21947921
http://dx.doi.org/10.1007/s10858-011-9547-8
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author Kloiber, Karin
Spitzer, Romana
Grutsch, Sarina
Kreutz, Christoph
Tollinger, Martin
author_facet Kloiber, Karin
Spitzer, Romana
Grutsch, Sarina
Kreutz, Christoph
Tollinger, Martin
author_sort Kloiber, Karin
collection PubMed
description Longitudinal exchange experiments facilitate the quantification of the rates of interconversion between the exchanging species, along with their longitudinal relaxation rates, by analyzing the time-dependence of direct correlation and exchange cross peaks. Here we present a simple and robust alternative to this strategy, which is based on the combination of two complementary experiments, one with and one without resolving exchange cross peaks. We show that by combining the two data sets systematic errors that are caused by differential line-broadening of the exchanging species are avoided and reliable quantification of kinetic and relaxation parameters in the presence of additional conformational exchange on the ms–μs time scale is possible. The strategy is applied to a bistable DNA oligomer that displays different line-broadening in the two exchanging species.
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spelling pubmed-31805932011-10-04 Longitudinal exchange: an alternative strategy towards quantification of dynamics parameters in ZZ exchange spectroscopy Kloiber, Karin Spitzer, Romana Grutsch, Sarina Kreutz, Christoph Tollinger, Martin J Biomol NMR Article Longitudinal exchange experiments facilitate the quantification of the rates of interconversion between the exchanging species, along with their longitudinal relaxation rates, by analyzing the time-dependence of direct correlation and exchange cross peaks. Here we present a simple and robust alternative to this strategy, which is based on the combination of two complementary experiments, one with and one without resolving exchange cross peaks. We show that by combining the two data sets systematic errors that are caused by differential line-broadening of the exchanging species are avoided and reliable quantification of kinetic and relaxation parameters in the presence of additional conformational exchange on the ms–μs time scale is possible. The strategy is applied to a bistable DNA oligomer that displays different line-broadening in the two exchanging species. Springer Netherlands 2011-09-27 2011 /pmc/articles/PMC3180593/ /pubmed/21947921 http://dx.doi.org/10.1007/s10858-011-9547-8 Text en © The Author(s) 2011 https://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution Noncommercial License which permits any noncommercial use, distribution, and reproduction in any medium, provided the original author(s) and source are credited.
spellingShingle Article
Kloiber, Karin
Spitzer, Romana
Grutsch, Sarina
Kreutz, Christoph
Tollinger, Martin
Longitudinal exchange: an alternative strategy towards quantification of dynamics parameters in ZZ exchange spectroscopy
title Longitudinal exchange: an alternative strategy towards quantification of dynamics parameters in ZZ exchange spectroscopy
title_full Longitudinal exchange: an alternative strategy towards quantification of dynamics parameters in ZZ exchange spectroscopy
title_fullStr Longitudinal exchange: an alternative strategy towards quantification of dynamics parameters in ZZ exchange spectroscopy
title_full_unstemmed Longitudinal exchange: an alternative strategy towards quantification of dynamics parameters in ZZ exchange spectroscopy
title_short Longitudinal exchange: an alternative strategy towards quantification of dynamics parameters in ZZ exchange spectroscopy
title_sort longitudinal exchange: an alternative strategy towards quantification of dynamics parameters in zz exchange spectroscopy
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3180593/
https://www.ncbi.nlm.nih.gov/pubmed/21947921
http://dx.doi.org/10.1007/s10858-011-9547-8
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