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Personal genomes in progress: from the Human Genome Project to the Personal Genome Project

The cost of a diploid human genome sequence has dropped from about $70M to $2000 since 2007- even as the standards for redundancy have increased from 7x to 40x in order to improve call rates. Coupled with the low return on investment for common single-nucleotide polymorphisms, this has caused a sign...

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Autores principales: Lunshof (Co-first author), Jeantine E., Bobe (Co-first author), Jason, Aach, John, Angrist, Misha, V. Thakuria, Joseph, Vorhaus, Daniel B., R. Hoehe (Co-last author), Margret, Church (Co-last author), George M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Les Laboratoires Servier 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3181947/
https://www.ncbi.nlm.nih.gov/pubmed/20373666
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author Lunshof (Co-first author), Jeantine E.
Bobe (Co-first author), Jason
Aach, John
Angrist, Misha
V. Thakuria, Joseph
Vorhaus, Daniel B.
R. Hoehe (Co-last author), Margret
Church (Co-last author), George M.
author_facet Lunshof (Co-first author), Jeantine E.
Bobe (Co-first author), Jason
Aach, John
Angrist, Misha
V. Thakuria, Joseph
Vorhaus, Daniel B.
R. Hoehe (Co-last author), Margret
Church (Co-last author), George M.
author_sort Lunshof (Co-first author), Jeantine E.
collection PubMed
description The cost of a diploid human genome sequence has dropped from about $70M to $2000 since 2007- even as the standards for redundancy have increased from 7x to 40x in order to improve call rates. Coupled with the low return on investment for common single-nucleotide polymorphisms, this has caused a significant rise in interest in correlating genome sequences with comprehensive environmental and trait data (GET). The cost of electronic health records, imaging, and microbial, immunological, and behavioral data are also dropping quickly. Sharing such integrated GET datasets and their interpretations with a diversity of researchers and research subjects highlights the need for informed-consent models capable of addressing novel privacy and other issues, as well as for flexible data-sharing resources that make materials and data available with minimum restrictions on use. This article examines the Personal Genome Project's effort to develop a GET database as a public genomics resource broadly accessible to both researchers and research participants, while pursuing the highest standards in research ethics.
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spelling pubmed-31819472011-10-27 Personal genomes in progress: from the Human Genome Project to the Personal Genome Project Lunshof (Co-first author), Jeantine E. Bobe (Co-first author), Jason Aach, John Angrist, Misha V. Thakuria, Joseph Vorhaus, Daniel B. R. Hoehe (Co-last author), Margret Church (Co-last author), George M. Dialogues Clin Neurosci Basic Research The cost of a diploid human genome sequence has dropped from about $70M to $2000 since 2007- even as the standards for redundancy have increased from 7x to 40x in order to improve call rates. Coupled with the low return on investment for common single-nucleotide polymorphisms, this has caused a significant rise in interest in correlating genome sequences with comprehensive environmental and trait data (GET). The cost of electronic health records, imaging, and microbial, immunological, and behavioral data are also dropping quickly. Sharing such integrated GET datasets and their interpretations with a diversity of researchers and research subjects highlights the need for informed-consent models capable of addressing novel privacy and other issues, as well as for flexible data-sharing resources that make materials and data available with minimum restrictions on use. This article examines the Personal Genome Project's effort to develop a GET database as a public genomics resource broadly accessible to both researchers and research participants, while pursuing the highest standards in research ethics. Les Laboratoires Servier 2010-03 /pmc/articles/PMC3181947/ /pubmed/20373666 Text en Copyright: © 2010 LLS http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc-nd/3.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Basic Research
Lunshof (Co-first author), Jeantine E.
Bobe (Co-first author), Jason
Aach, John
Angrist, Misha
V. Thakuria, Joseph
Vorhaus, Daniel B.
R. Hoehe (Co-last author), Margret
Church (Co-last author), George M.
Personal genomes in progress: from the Human Genome Project to the Personal Genome Project
title Personal genomes in progress: from the Human Genome Project to the Personal Genome Project
title_full Personal genomes in progress: from the Human Genome Project to the Personal Genome Project
title_fullStr Personal genomes in progress: from the Human Genome Project to the Personal Genome Project
title_full_unstemmed Personal genomes in progress: from the Human Genome Project to the Personal Genome Project
title_short Personal genomes in progress: from the Human Genome Project to the Personal Genome Project
title_sort personal genomes in progress: from the human genome project to the personal genome project
topic Basic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3181947/
https://www.ncbi.nlm.nih.gov/pubmed/20373666
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