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The Effect of Heterogeneity on Invasion in Spatial Epidemics: From Theory to Experimental Evidence in a Model System

Heterogeneity in host populations is an important factor affecting the ability of a pathogen to invade, yet the quantitative investigation of its effects on epidemic spread is still an open problem. In this paper, we test recent theoretical results, which extend the established “percolation paradigm...

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Autores principales: Neri, Franco M., Bates, Anne, Füchtbauer, Winnie S., Pérez-Reche, Francisco J., Taraskin, Sergei N., Otten, Wilfred, Bailey, Douglas J., Gilligan, Christopher A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3182855/
https://www.ncbi.nlm.nih.gov/pubmed/21980273
http://dx.doi.org/10.1371/journal.pcbi.1002174
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author Neri, Franco M.
Bates, Anne
Füchtbauer, Winnie S.
Pérez-Reche, Francisco J.
Taraskin, Sergei N.
Otten, Wilfred
Bailey, Douglas J.
Gilligan, Christopher A.
author_facet Neri, Franco M.
Bates, Anne
Füchtbauer, Winnie S.
Pérez-Reche, Francisco J.
Taraskin, Sergei N.
Otten, Wilfred
Bailey, Douglas J.
Gilligan, Christopher A.
author_sort Neri, Franco M.
collection PubMed
description Heterogeneity in host populations is an important factor affecting the ability of a pathogen to invade, yet the quantitative investigation of its effects on epidemic spread is still an open problem. In this paper, we test recent theoretical results, which extend the established “percolation paradigm” to the spread of a pathogen in discrete heterogeneous host populations. In particular, we test the hypothesis that the probability of epidemic invasion decreases when host heterogeneity is increased. We use replicated experimental microcosms, in which the ubiquitous pathogenic fungus Rhizoctonia solani grows through a population of discrete nutrient sites on a lattice, with nutrient sites representing hosts. The degree of host heterogeneity within different populations is adjusted by changing the proportion and the nutrient concentration of nutrient sites. The experimental data are analysed via Bayesian inference methods, estimating pathogen transmission parameters for each individual population. We find a significant, negative correlation between heterogeneity and the probability of pathogen invasion, thereby validating the theory. The value of the correlation is also in remarkably good agreement with the theoretical predictions. We briefly discuss how our results can be exploited in the design and implementation of disease control strategies.
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spelling pubmed-31828552011-10-06 The Effect of Heterogeneity on Invasion in Spatial Epidemics: From Theory to Experimental Evidence in a Model System Neri, Franco M. Bates, Anne Füchtbauer, Winnie S. Pérez-Reche, Francisco J. Taraskin, Sergei N. Otten, Wilfred Bailey, Douglas J. Gilligan, Christopher A. PLoS Comput Biol Research Article Heterogeneity in host populations is an important factor affecting the ability of a pathogen to invade, yet the quantitative investigation of its effects on epidemic spread is still an open problem. In this paper, we test recent theoretical results, which extend the established “percolation paradigm” to the spread of a pathogen in discrete heterogeneous host populations. In particular, we test the hypothesis that the probability of epidemic invasion decreases when host heterogeneity is increased. We use replicated experimental microcosms, in which the ubiquitous pathogenic fungus Rhizoctonia solani grows through a population of discrete nutrient sites on a lattice, with nutrient sites representing hosts. The degree of host heterogeneity within different populations is adjusted by changing the proportion and the nutrient concentration of nutrient sites. The experimental data are analysed via Bayesian inference methods, estimating pathogen transmission parameters for each individual population. We find a significant, negative correlation between heterogeneity and the probability of pathogen invasion, thereby validating the theory. The value of the correlation is also in remarkably good agreement with the theoretical predictions. We briefly discuss how our results can be exploited in the design and implementation of disease control strategies. Public Library of Science 2011-09-29 /pmc/articles/PMC3182855/ /pubmed/21980273 http://dx.doi.org/10.1371/journal.pcbi.1002174 Text en Neri et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Neri, Franco M.
Bates, Anne
Füchtbauer, Winnie S.
Pérez-Reche, Francisco J.
Taraskin, Sergei N.
Otten, Wilfred
Bailey, Douglas J.
Gilligan, Christopher A.
The Effect of Heterogeneity on Invasion in Spatial Epidemics: From Theory to Experimental Evidence in a Model System
title The Effect of Heterogeneity on Invasion in Spatial Epidemics: From Theory to Experimental Evidence in a Model System
title_full The Effect of Heterogeneity on Invasion in Spatial Epidemics: From Theory to Experimental Evidence in a Model System
title_fullStr The Effect of Heterogeneity on Invasion in Spatial Epidemics: From Theory to Experimental Evidence in a Model System
title_full_unstemmed The Effect of Heterogeneity on Invasion in Spatial Epidemics: From Theory to Experimental Evidence in a Model System
title_short The Effect of Heterogeneity on Invasion in Spatial Epidemics: From Theory to Experimental Evidence in a Model System
title_sort effect of heterogeneity on invasion in spatial epidemics: from theory to experimental evidence in a model system
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3182855/
https://www.ncbi.nlm.nih.gov/pubmed/21980273
http://dx.doi.org/10.1371/journal.pcbi.1002174
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