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The Effect of Heterogeneity on Invasion in Spatial Epidemics: From Theory to Experimental Evidence in a Model System
Heterogeneity in host populations is an important factor affecting the ability of a pathogen to invade, yet the quantitative investigation of its effects on epidemic spread is still an open problem. In this paper, we test recent theoretical results, which extend the established “percolation paradigm...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3182855/ https://www.ncbi.nlm.nih.gov/pubmed/21980273 http://dx.doi.org/10.1371/journal.pcbi.1002174 |
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author | Neri, Franco M. Bates, Anne Füchtbauer, Winnie S. Pérez-Reche, Francisco J. Taraskin, Sergei N. Otten, Wilfred Bailey, Douglas J. Gilligan, Christopher A. |
author_facet | Neri, Franco M. Bates, Anne Füchtbauer, Winnie S. Pérez-Reche, Francisco J. Taraskin, Sergei N. Otten, Wilfred Bailey, Douglas J. Gilligan, Christopher A. |
author_sort | Neri, Franco M. |
collection | PubMed |
description | Heterogeneity in host populations is an important factor affecting the ability of a pathogen to invade, yet the quantitative investigation of its effects on epidemic spread is still an open problem. In this paper, we test recent theoretical results, which extend the established “percolation paradigm” to the spread of a pathogen in discrete heterogeneous host populations. In particular, we test the hypothesis that the probability of epidemic invasion decreases when host heterogeneity is increased. We use replicated experimental microcosms, in which the ubiquitous pathogenic fungus Rhizoctonia solani grows through a population of discrete nutrient sites on a lattice, with nutrient sites representing hosts. The degree of host heterogeneity within different populations is adjusted by changing the proportion and the nutrient concentration of nutrient sites. The experimental data are analysed via Bayesian inference methods, estimating pathogen transmission parameters for each individual population. We find a significant, negative correlation between heterogeneity and the probability of pathogen invasion, thereby validating the theory. The value of the correlation is also in remarkably good agreement with the theoretical predictions. We briefly discuss how our results can be exploited in the design and implementation of disease control strategies. |
format | Online Article Text |
id | pubmed-3182855 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-31828552011-10-06 The Effect of Heterogeneity on Invasion in Spatial Epidemics: From Theory to Experimental Evidence in a Model System Neri, Franco M. Bates, Anne Füchtbauer, Winnie S. Pérez-Reche, Francisco J. Taraskin, Sergei N. Otten, Wilfred Bailey, Douglas J. Gilligan, Christopher A. PLoS Comput Biol Research Article Heterogeneity in host populations is an important factor affecting the ability of a pathogen to invade, yet the quantitative investigation of its effects on epidemic spread is still an open problem. In this paper, we test recent theoretical results, which extend the established “percolation paradigm” to the spread of a pathogen in discrete heterogeneous host populations. In particular, we test the hypothesis that the probability of epidemic invasion decreases when host heterogeneity is increased. We use replicated experimental microcosms, in which the ubiquitous pathogenic fungus Rhizoctonia solani grows through a population of discrete nutrient sites on a lattice, with nutrient sites representing hosts. The degree of host heterogeneity within different populations is adjusted by changing the proportion and the nutrient concentration of nutrient sites. The experimental data are analysed via Bayesian inference methods, estimating pathogen transmission parameters for each individual population. We find a significant, negative correlation between heterogeneity and the probability of pathogen invasion, thereby validating the theory. The value of the correlation is also in remarkably good agreement with the theoretical predictions. We briefly discuss how our results can be exploited in the design and implementation of disease control strategies. Public Library of Science 2011-09-29 /pmc/articles/PMC3182855/ /pubmed/21980273 http://dx.doi.org/10.1371/journal.pcbi.1002174 Text en Neri et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Neri, Franco M. Bates, Anne Füchtbauer, Winnie S. Pérez-Reche, Francisco J. Taraskin, Sergei N. Otten, Wilfred Bailey, Douglas J. Gilligan, Christopher A. The Effect of Heterogeneity on Invasion in Spatial Epidemics: From Theory to Experimental Evidence in a Model System |
title | The Effect of Heterogeneity on Invasion in Spatial Epidemics: From Theory to Experimental Evidence in a Model System |
title_full | The Effect of Heterogeneity on Invasion in Spatial Epidemics: From Theory to Experimental Evidence in a Model System |
title_fullStr | The Effect of Heterogeneity on Invasion in Spatial Epidemics: From Theory to Experimental Evidence in a Model System |
title_full_unstemmed | The Effect of Heterogeneity on Invasion in Spatial Epidemics: From Theory to Experimental Evidence in a Model System |
title_short | The Effect of Heterogeneity on Invasion in Spatial Epidemics: From Theory to Experimental Evidence in a Model System |
title_sort | effect of heterogeneity on invasion in spatial epidemics: from theory to experimental evidence in a model system |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3182855/ https://www.ncbi.nlm.nih.gov/pubmed/21980273 http://dx.doi.org/10.1371/journal.pcbi.1002174 |
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