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Dynamical Consequences of Bandpass Feedback Loops in a Bacterial Phosphorelay

Under conditions of nutrient limitation, Bacillus subtilis cells terminally differentiate into a dormant spore state. Progression to sporulation is controlled by a genetic circuit consisting of a phosphorelay embedded in multiple transcriptional feedback loops, which is used to activate the master r...

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Autores principales: Sen, Shaunak, Garcia-Ojalvo, Jordi, Elowitz, Michael B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3182994/
https://www.ncbi.nlm.nih.gov/pubmed/21980382
http://dx.doi.org/10.1371/journal.pone.0025102
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author Sen, Shaunak
Garcia-Ojalvo, Jordi
Elowitz, Michael B.
author_facet Sen, Shaunak
Garcia-Ojalvo, Jordi
Elowitz, Michael B.
author_sort Sen, Shaunak
collection PubMed
description Under conditions of nutrient limitation, Bacillus subtilis cells terminally differentiate into a dormant spore state. Progression to sporulation is controlled by a genetic circuit consisting of a phosphorelay embedded in multiple transcriptional feedback loops, which is used to activate the master regulator Spo0A by phosphorylation. These transcriptional regulatory interactions are “bandpass”-like, in the sense that activation occurs within a limited band of Spo0A∼P concentrations. Additionally, recent results show that the phosphorelay activation occurs in pulses, in a cell-cycle dependent fashion. However, the impact of these pulsed bandpass interactions on the circuit dynamics preceding sporulation remains unclear. In order to address this question, we measured key features of the bandpass interactions at the single-cell level and analyzed them in the context of a simple mathematical model. The model predicted the emergence of a delayed phase shift between the pulsing activity of the different sporulation genes, as well as the existence of a stable state, with elevated Spo0A activity but no sporulation, embedded within the dynamical structure of the system. To test the model, we used time-lapse fluorescence microscopy to measure dynamics of single cells initiating sporulation. We observed the delayed phase shift emerging during the progression to sporulation, while a re-engineering of the sporulation circuit revealed behavior resembling the predicted additional state. These results show that periodically-driven bandpass feedback loops can give rise to complex dynamics in the progression towards sporulation.
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spelling pubmed-31829942011-10-06 Dynamical Consequences of Bandpass Feedback Loops in a Bacterial Phosphorelay Sen, Shaunak Garcia-Ojalvo, Jordi Elowitz, Michael B. PLoS One Research Article Under conditions of nutrient limitation, Bacillus subtilis cells terminally differentiate into a dormant spore state. Progression to sporulation is controlled by a genetic circuit consisting of a phosphorelay embedded in multiple transcriptional feedback loops, which is used to activate the master regulator Spo0A by phosphorylation. These transcriptional regulatory interactions are “bandpass”-like, in the sense that activation occurs within a limited band of Spo0A∼P concentrations. Additionally, recent results show that the phosphorelay activation occurs in pulses, in a cell-cycle dependent fashion. However, the impact of these pulsed bandpass interactions on the circuit dynamics preceding sporulation remains unclear. In order to address this question, we measured key features of the bandpass interactions at the single-cell level and analyzed them in the context of a simple mathematical model. The model predicted the emergence of a delayed phase shift between the pulsing activity of the different sporulation genes, as well as the existence of a stable state, with elevated Spo0A activity but no sporulation, embedded within the dynamical structure of the system. To test the model, we used time-lapse fluorescence microscopy to measure dynamics of single cells initiating sporulation. We observed the delayed phase shift emerging during the progression to sporulation, while a re-engineering of the sporulation circuit revealed behavior resembling the predicted additional state. These results show that periodically-driven bandpass feedback loops can give rise to complex dynamics in the progression towards sporulation. Public Library of Science 2011-09-29 /pmc/articles/PMC3182994/ /pubmed/21980382 http://dx.doi.org/10.1371/journal.pone.0025102 Text en Sen et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Sen, Shaunak
Garcia-Ojalvo, Jordi
Elowitz, Michael B.
Dynamical Consequences of Bandpass Feedback Loops in a Bacterial Phosphorelay
title Dynamical Consequences of Bandpass Feedback Loops in a Bacterial Phosphorelay
title_full Dynamical Consequences of Bandpass Feedback Loops in a Bacterial Phosphorelay
title_fullStr Dynamical Consequences of Bandpass Feedback Loops in a Bacterial Phosphorelay
title_full_unstemmed Dynamical Consequences of Bandpass Feedback Loops in a Bacterial Phosphorelay
title_short Dynamical Consequences of Bandpass Feedback Loops in a Bacterial Phosphorelay
title_sort dynamical consequences of bandpass feedback loops in a bacterial phosphorelay
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3182994/
https://www.ncbi.nlm.nih.gov/pubmed/21980382
http://dx.doi.org/10.1371/journal.pone.0025102
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