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Towards resolving the transcription factor network controlling myelin gene expression

In the central nervous system (CNS), myelin is produced from spirally-wrapped oligodendrocyte plasma membrane and, as exemplified by the debilitating effects of inherited or acquired myelin abnormalities in diseases such as multiple sclerosis, it plays a critical role in nervous system function. Mye...

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Autores principales: Fulton, Debra L., Denarier, Eric, Friedman, Hana C., Wasserman, Wyeth W., Peterson, Alan C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3185407/
https://www.ncbi.nlm.nih.gov/pubmed/21729871
http://dx.doi.org/10.1093/nar/gkr326
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author Fulton, Debra L.
Denarier, Eric
Friedman, Hana C.
Wasserman, Wyeth W.
Peterson, Alan C.
author_facet Fulton, Debra L.
Denarier, Eric
Friedman, Hana C.
Wasserman, Wyeth W.
Peterson, Alan C.
author_sort Fulton, Debra L.
collection PubMed
description In the central nervous system (CNS), myelin is produced from spirally-wrapped oligodendrocyte plasma membrane and, as exemplified by the debilitating effects of inherited or acquired myelin abnormalities in diseases such as multiple sclerosis, it plays a critical role in nervous system function. Myelin sheath production coincides with rapid up-regulation of numerous genes. The complexity of their subsequent expression patterns, along with recently recognized heterogeneity within the oligodendrocyte lineage, suggest that the regulatory networks controlling such genes drive multiple context-specific transcriptional programs. Conferring this nuanced level of control likely involves a large repertoire of interacting transcription factors (TFs). Here, we combined novel strategies of computational sequence analyses with in vivo functional analysis to establish a TF network model of coordinate myelin-associated gene transcription. Notably, the network model captures regulatory DNA elements and TFs known to regulate oligodendrocyte myelin gene transcription and/or oligodendrocyte development, thereby validating our approach. Further, it links to numerous TFs with previously unsuspected roles in CNS myelination and suggests collaborative relationships amongst both known and novel TFs, thus providing deeper insight into the myelin gene transcriptional network.
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spelling pubmed-31854072011-10-04 Towards resolving the transcription factor network controlling myelin gene expression Fulton, Debra L. Denarier, Eric Friedman, Hana C. Wasserman, Wyeth W. Peterson, Alan C. Nucleic Acids Res Gene Regulation, Chromatin and Epigenetics In the central nervous system (CNS), myelin is produced from spirally-wrapped oligodendrocyte plasma membrane and, as exemplified by the debilitating effects of inherited or acquired myelin abnormalities in diseases such as multiple sclerosis, it plays a critical role in nervous system function. Myelin sheath production coincides with rapid up-regulation of numerous genes. The complexity of their subsequent expression patterns, along with recently recognized heterogeneity within the oligodendrocyte lineage, suggest that the regulatory networks controlling such genes drive multiple context-specific transcriptional programs. Conferring this nuanced level of control likely involves a large repertoire of interacting transcription factors (TFs). Here, we combined novel strategies of computational sequence analyses with in vivo functional analysis to establish a TF network model of coordinate myelin-associated gene transcription. Notably, the network model captures regulatory DNA elements and TFs known to regulate oligodendrocyte myelin gene transcription and/or oligodendrocyte development, thereby validating our approach. Further, it links to numerous TFs with previously unsuspected roles in CNS myelination and suggests collaborative relationships amongst both known and novel TFs, thus providing deeper insight into the myelin gene transcriptional network. Oxford University Press 2011-10 2011-07-05 /pmc/articles/PMC3185407/ /pubmed/21729871 http://dx.doi.org/10.1093/nar/gkr326 Text en © The Author(s) 2011. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Gene Regulation, Chromatin and Epigenetics
Fulton, Debra L.
Denarier, Eric
Friedman, Hana C.
Wasserman, Wyeth W.
Peterson, Alan C.
Towards resolving the transcription factor network controlling myelin gene expression
title Towards resolving the transcription factor network controlling myelin gene expression
title_full Towards resolving the transcription factor network controlling myelin gene expression
title_fullStr Towards resolving the transcription factor network controlling myelin gene expression
title_full_unstemmed Towards resolving the transcription factor network controlling myelin gene expression
title_short Towards resolving the transcription factor network controlling myelin gene expression
title_sort towards resolving the transcription factor network controlling myelin gene expression
topic Gene Regulation, Chromatin and Epigenetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3185407/
https://www.ncbi.nlm.nih.gov/pubmed/21729871
http://dx.doi.org/10.1093/nar/gkr326
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