Cargando…

Coevolution of amino acid residues in the key photosynthetic enzyme Rubisco

BACKGROUND: One of the key forces shaping proteins is coevolution of amino acid residues. Knowing which residues coevolve in a particular protein may facilitate our understanding of protein evolution, structure and function, and help to identify substitutions that may lead to desired changes in enzy...

Descripción completa

Detalles Bibliográficos
Autores principales:	Wang, Mingcong, Kapralov, Maxim V, Anisimova, Maria
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2011
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3190394/ https://www.ncbi.nlm.nih.gov/pubmed/21942934 http://dx.doi.org/10.1186/1471-2148-11-266

Ejemplares similares

Widespread positive selection in the photosynthetic Rubisco enzyme
por: Kapralov, Maxim V, et al.
Publicado: (2007)

Positively selected amino acid replacements within the RuBisCO enzyme of oak trees are associated with ecological adaptations
por: Hermida-Carrera, Carmen, et al.
Publicado: (2017)

Correction: Positively selected amino acid replacements within the RuBisCO enzyme of oak trees are associated with ecological adaptations
por: Hermida-Carrera, Carmen, et al.
Publicado: (2017)

Rubisco Evolution in C(4) Eudicots: An Analysis of Amaranthaceae Sensu Lato
por: Kapralov, Maxim V., et al.
Publicado: (2012)

Predicting plant Rubisco kinetics from RbcL sequence data using machine learning
por: Iqbal, Wasim A, et al.
Publicado: (2022)

Kranz and single-cell forms of C(4) plants in the subfamily Suaedoideae show kinetic C(4) convergence for PEPC and Rubisco with divergent amino acid substitutions
por: Rosnow, Josh J., et al.
Publicado: (2015)

Nuclear–Cytoplasmic Coevolution Analysis of RuBisCO in Synthesized Cucumis Allopolyploid
por: Zhai, Yufei, et al.
Publicado: (2019)

The Coevolution of RuBisCO, Photorespiration, and Carbon Concentrating Mechanisms in Higher Plants
por: Cummins, Peter L.
Publicado: (2021)

Rubisco substitutions predicted to enhance crop performance through carbon uptake modelling
por: Iqbal, Wasim A, et al.
Publicado: (2021)

Rubisco in planta k(cat) is regulated in balance with photosynthetic electron transport
por: Eichelmann, H., et al.
Publicado: (2009)

Exploring molecular evolution of Rubisco in C(3) and CAM Orchidaceae and Bromeliaceae
por: Hermida-Carrera, Carmen, et al.
Publicado: (2020)

The RUBISCO to Photosystem II Ratio Limits the Maximum Photosynthetic Rate in Picocyanobacteria
por: Zorz, Jackie K., et al.
Publicado: (2015)

Coevolution-based prediction of key allosteric residues for protein function regulation
por: Xie, Juan, et al.
Publicado: (2023)

Thermal acclimation of photosynthetic activity and RuBisCO content in two hybrid poplar clones
por: Benomar, Lahcen, et al.
Publicado: (2019)

Coevolution in Hybrid Genomes: Nuclear-Encoded Rubisco Small Subunits and Their Plastid-Targeting Translocons Accompanying Sequential Allopolyploidy Events in Triticum
por: Li, Changping, et al.
Publicado: (2020)

Integrated Analysis of Residue Coevolution and Protein Structures Capture Key Protein Sectors in HIV-1 Proteins
por: Zhao, Yuqi, et al.
Publicado: (2015)

Rubisco Activases: AAA+ Chaperones Adapted to Enzyme Repair
por: Bhat, Javaid Y., et al.
Publicado: (2017)

New methods to measure residues coevolution in proteins
por: Gao, Hongyun, et al.
Publicado: (2011)

Photosynthetic limitations in two Antarctic vascular plants: importance of leaf anatomical traits and Rubisco kinetic parameters
por: Sáez, Patricia L, et al.
Publicado: (2017)

Coevolution-based inference of amino acid interactions underlying protein function
por: Salinas, Victor H, et al.
Publicado: (2018)

Molecular mechanism of Rubisco activase: Dynamic assembly and Rubisco remodeling
por: Waheeda, Kazi, et al.
Publicado: (2023)

Faster than expected Rubisco deactivation in shade reduces cowpea photosynthetic potential in variable light conditions
por: Taylor, Samuel H., et al.
Publicado: (2022)

Interspecies Comparison of Interaction Energies between Photosynthetic Protein RuBisCO and 2CABP Ligand
por: Fujii, Masayasu, et al.
Publicado: (2022)

RuBisCO in Non-Photosynthetic Alga Euglena longa: Divergent Features, Transcriptomic Analysis and Regulation of Complex Formation
por: Záhonová, Kristína, et al.
Publicado: (2016)

A compendium of temperature responses of Rubisco kinetic traits: variability among and within photosynthetic groups and impacts on photosynthesis modeling
por: Galmés, Jeroni, et al.
Publicado: (2016)

Directions for Optimization of Photosynthetic Carbon Fixation: RuBisCO's Efficiency May Not Be So Constrained After All
por: Cummins, Peter L., et al.
Publicado: (2018)

Integrated Analysis of Residue Coevolution and Protein Structure in ABC Transporters
por: Gulyás-Kovács, Attila
Publicado: (2012)

Carboxysome encapsulation of the CO(2)-fixing enzyme Rubisco in tobacco chloroplasts
por: Long, Benedict M., et al.
Publicado: (2018)

Correction: Integrated Analysis of Residue Coevolution and Protein Structures Capture Key Protein Sectors in HIV-1 Proteins
Publicado: (2015)

The Catalytic Machinery of a Key Enzyme in Amino Acid Biosynthesis
por: Viola, Ronald E., et al.
Publicado: (2011)

Characterization of C-ring component assembly in flagellar motors from amino acid coevolution
por: dos Santos, Ricardo Nascimento, et al.
Publicado: (2018)

The state of oligomerization of Rubisco controls the rate of synthesis of the Rubisco large subunit in Chlamydomonas reinhardtii
por: Wietrzynski, Wojciech, et al.
Publicado: (2021)

Isotope labelling of Rubisco subunits provides in vivo information on subcellular biosynthesis and exchange of amino acids between compartments
por: Allen, Doug K, et al.
Publicado: (2012)

Rubisco Assembly in the Chloroplast
por: Vitlin Gruber, Anna, et al.
Publicado: (2018)

Commentary: Directions for Optimization of Photosynthetic Carbon Fixation: RuBisCO's Efficiency May Not Be So Constrained After All
por: Tcherkez, Guillaume G., et al.
Publicado: (2018)

Author Correction: Faster than expected Rubisco deactivation in shade reduces cowpea photosynthetic potential in variable light conditions
por: Taylor, Samuel H., et al.
Publicado: (2022)

Coevolution analyses illuminate the dependencies between amino acid sites in the chaperonin system GroES-L
por: Ruiz-González, Mario X, et al.
Publicado: (2013)

Markov Models of Amino Acid Substitution to Study Proteins with Intrinsically Disordered Regions
por: Szalkowski, Adam M., et al.
Publicado: (2011)

Identification of key amino acid residues in AtUMAMIT29 for transport of glucosinolates
por: Meyer, Lasse, et al.
Publicado: (2023)

Amino acid coevolution reveals three-dimensional structure and functional domains of insect odorant receptors
por: Hopf, Thomas A., et al.
Publicado: (2015)

Cannot write session to /tmp/vufind_sessions/sess_ml53m21o44jjletvjqhjmbc36q