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Negation detection in Swedish clinical text: An adaption of NegEx to Swedish
BACKGROUND: Most methods for negation detection in clinical text have been developed for English text, and there is a need for evaluating the feasibility of adapting these methods to other languages. A Swedish adaption of the English rule-based negation detection system NegEx, which detects negation...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2011
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3194175/ https://www.ncbi.nlm.nih.gov/pubmed/21992616 http://dx.doi.org/10.1186/2041-1480-2-S3-S3 |
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author | Skeppstedt, Maria |
author_facet | Skeppstedt, Maria |
author_sort | Skeppstedt, Maria |
collection | PubMed |
description | BACKGROUND: Most methods for negation detection in clinical text have been developed for English text, and there is a need for evaluating the feasibility of adapting these methods to other languages. A Swedish adaption of the English rule-based negation detection system NegEx, which detects negations through the use of trigger phrases, was therefore evaluated. RESULTS: The Swedish adaption of NegEx showed a precision of 75.2% and a recall of 81.9%, when evaluated on 558 manually classified sentences containing negation triggers, and a negative predictive value of 96.5% when evaluated on 342 sentences not containing negation triggers. CONCLUSIONS: The precision was significantly lower for the Swedish adaptation than published results for the English version, but since many negated propositions were identified through a limited set of trigger phrases, it could nevertheless be concluded that the same trigger phrase approach is possible in a Swedish context, even though it needs to be further developed. AVAILABILITY: The triggers used for the evaluation of the Swedish adaption of NegEx are available at http://people.dsv.su.se/~mariask/resources/triggers.txt and can be used together with the original NegEx program for negation detection in Swedish clinical text. |
format | Online Article Text |
id | pubmed-3194175 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-31941752011-10-17 Negation detection in Swedish clinical text: An adaption of NegEx to Swedish Skeppstedt, Maria J Biomed Semantics Proceedings BACKGROUND: Most methods for negation detection in clinical text have been developed for English text, and there is a need for evaluating the feasibility of adapting these methods to other languages. A Swedish adaption of the English rule-based negation detection system NegEx, which detects negations through the use of trigger phrases, was therefore evaluated. RESULTS: The Swedish adaption of NegEx showed a precision of 75.2% and a recall of 81.9%, when evaluated on 558 manually classified sentences containing negation triggers, and a negative predictive value of 96.5% when evaluated on 342 sentences not containing negation triggers. CONCLUSIONS: The precision was significantly lower for the Swedish adaptation than published results for the English version, but since many negated propositions were identified through a limited set of trigger phrases, it could nevertheless be concluded that the same trigger phrase approach is possible in a Swedish context, even though it needs to be further developed. AVAILABILITY: The triggers used for the evaluation of the Swedish adaption of NegEx are available at http://people.dsv.su.se/~mariask/resources/triggers.txt and can be used together with the original NegEx program for negation detection in Swedish clinical text. BioMed Central 2011-07-14 /pmc/articles/PMC3194175/ /pubmed/21992616 http://dx.doi.org/10.1186/2041-1480-2-S3-S3 Text en Copyright ©2011 Skeppstedt; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Proceedings Skeppstedt, Maria Negation detection in Swedish clinical text: An adaption of NegEx to Swedish |
title | Negation detection in Swedish clinical text: An adaption of NegEx to Swedish |
title_full | Negation detection in Swedish clinical text: An adaption of NegEx to Swedish |
title_fullStr | Negation detection in Swedish clinical text: An adaption of NegEx to Swedish |
title_full_unstemmed | Negation detection in Swedish clinical text: An adaption of NegEx to Swedish |
title_short | Negation detection in Swedish clinical text: An adaption of NegEx to Swedish |
title_sort | negation detection in swedish clinical text: an adaption of negex to swedish |
topic | Proceedings |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3194175/ https://www.ncbi.nlm.nih.gov/pubmed/21992616 http://dx.doi.org/10.1186/2041-1480-2-S3-S3 |
work_keys_str_mv | AT skeppstedtmaria negationdetectioninswedishclinicaltextanadaptionofnegextoswedish |