Toward a comprehensive language for biological systems

Rule-based modeling has become a powerful approach for modeling intracellular networks, which are characterized by rich molecular diversity. Truly comprehensive models of cell behavior, however, must address spatial complexity at both the intracellular level and at the level of interacting populatio...

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Detalles Bibliográficos
Autor principal: Faeder, James R
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2011
Materias:
Commentary
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3195790/
https://www.ncbi.nlm.nih.gov/pubmed/22005092
http://dx.doi.org/10.1186/1741-7007-9-68
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author Faeder, James R
author_facet Faeder, James R
author_sort Faeder, James R
collection PubMed
description Rule-based modeling has become a powerful approach for modeling intracellular networks, which are characterized by rich molecular diversity. Truly comprehensive models of cell behavior, however, must address spatial complexity at both the intracellular level and at the level of interacting populations of cells, and will require richer modeling languages and tools. A recent paper in BMC Systems Biology represents a signifcant step toward the development of a unified modeling language and software platform for the development of multi-level, multiscale biological models. See research article: http://www.biomedcentral.com/1752-0509/5/166
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spelling pubmed-31957902011-10-19 Toward a comprehensive language for biological systems Faeder, James R BMC Biol Commentary Rule-based modeling has become a powerful approach for modeling intracellular networks, which are characterized by rich molecular diversity. Truly comprehensive models of cell behavior, however, must address spatial complexity at both the intracellular level and at the level of interacting populations of cells, and will require richer modeling languages and tools. A recent paper in BMC Systems Biology represents a signifcant step toward the development of a unified modeling language and software platform for the development of multi-level, multiscale biological models. See research article: http://www.biomedcentral.com/1752-0509/5/166 BioMed Central 2011-10-17 /pmc/articles/PMC3195790/ /pubmed/22005092 http://dx.doi.org/10.1186/1741-7007-9-68 Text en Copyright ©2011 Faeder; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Commentary
Faeder, James R
Toward a comprehensive language for biological systems
title Toward a comprehensive language for biological systems
title_full Toward a comprehensive language for biological systems
title_fullStr Toward a comprehensive language for biological systems
title_full_unstemmed Toward a comprehensive language for biological systems
title_short Toward a comprehensive language for biological systems
title_sort toward a comprehensive language for biological systems
topic Commentary
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3195790/
https://www.ncbi.nlm.nih.gov/pubmed/22005092
http://dx.doi.org/10.1186/1741-7007-9-68
work_keys_str_mv AT faederjamesr towardacomprehensivelanguageforbiologicalsystems

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