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Decoding Complex Chemical Mixtures with a Physical Model of a Sensor Array
Combinatorial sensor arrays, such as the olfactory system, can detect a large number of analytes using a relatively small number of receptors. However, the complex pattern of receptor responses to even a single analyte, coupled with the non-linearity of responses to mixtures of analytes, makes quant...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3202980/ https://www.ncbi.nlm.nih.gov/pubmed/22046111 http://dx.doi.org/10.1371/journal.pcbi.1002224 |
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author | Tsitron, Julia Ault, Addison D. Broach, James R. Morozov, Alexandre V. |
author_facet | Tsitron, Julia Ault, Addison D. Broach, James R. Morozov, Alexandre V. |
author_sort | Tsitron, Julia |
collection | PubMed |
description | Combinatorial sensor arrays, such as the olfactory system, can detect a large number of analytes using a relatively small number of receptors. However, the complex pattern of receptor responses to even a single analyte, coupled with the non-linearity of responses to mixtures of analytes, makes quantitative prediction of compound concentrations in a mixture a challenging task. Here we develop a physical model that explicitly takes receptor-ligand interactions into account, and apply it to infer concentrations of highly related sugar nucleotides from the output of four engineered G-protein-coupled receptors. We also derive design principles that enable accurate mixture discrimination with cross-specific sensor arrays. The optimal sensor parameters exhibit relatively weak dependence on component concentrations, making a single designed array useful for analyzing a sizable range of mixtures. The maximum number of mixture components that can be successfully discriminated is twice the number of sensors in the array. Finally, antagonistic receptor responses, well-known to play an important role in natural olfactory systems, prove to be essential for the accurate prediction of component concentrations. |
format | Online Article Text |
id | pubmed-3202980 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-32029802011-11-01 Decoding Complex Chemical Mixtures with a Physical Model of a Sensor Array Tsitron, Julia Ault, Addison D. Broach, James R. Morozov, Alexandre V. PLoS Comput Biol Research Article Combinatorial sensor arrays, such as the olfactory system, can detect a large number of analytes using a relatively small number of receptors. However, the complex pattern of receptor responses to even a single analyte, coupled with the non-linearity of responses to mixtures of analytes, makes quantitative prediction of compound concentrations in a mixture a challenging task. Here we develop a physical model that explicitly takes receptor-ligand interactions into account, and apply it to infer concentrations of highly related sugar nucleotides from the output of four engineered G-protein-coupled receptors. We also derive design principles that enable accurate mixture discrimination with cross-specific sensor arrays. The optimal sensor parameters exhibit relatively weak dependence on component concentrations, making a single designed array useful for analyzing a sizable range of mixtures. The maximum number of mixture components that can be successfully discriminated is twice the number of sensors in the array. Finally, antagonistic receptor responses, well-known to play an important role in natural olfactory systems, prove to be essential for the accurate prediction of component concentrations. Public Library of Science 2011-10-20 /pmc/articles/PMC3202980/ /pubmed/22046111 http://dx.doi.org/10.1371/journal.pcbi.1002224 Text en Tsitron et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Tsitron, Julia Ault, Addison D. Broach, James R. Morozov, Alexandre V. Decoding Complex Chemical Mixtures with a Physical Model of a Sensor Array |
title | Decoding Complex Chemical Mixtures with a Physical Model of a Sensor Array |
title_full | Decoding Complex Chemical Mixtures with a Physical Model of a Sensor Array |
title_fullStr | Decoding Complex Chemical Mixtures with a Physical Model of a Sensor Array |
title_full_unstemmed | Decoding Complex Chemical Mixtures with a Physical Model of a Sensor Array |
title_short | Decoding Complex Chemical Mixtures with a Physical Model of a Sensor Array |
title_sort | decoding complex chemical mixtures with a physical model of a sensor array |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3202980/ https://www.ncbi.nlm.nih.gov/pubmed/22046111 http://dx.doi.org/10.1371/journal.pcbi.1002224 |
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