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A First Attempt to Bring Computational Biology into Advanced High School Biology Classrooms

Computer science has become ubiquitous in many areas of biological research, yet most high school and even college students are unaware of this. As a result, many college biology majors graduate without adequate computational skills for contemporary fields of biology. The absence of a computational...

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Autores principales: Gallagher, Suzanne Renick, Coon, William, Donley, Kristin, Scott, Abby, Goldberg, Debra S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3203055/
https://www.ncbi.nlm.nih.gov/pubmed/22046118
http://dx.doi.org/10.1371/journal.pcbi.1002244
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author Gallagher, Suzanne Renick
Coon, William
Donley, Kristin
Scott, Abby
Goldberg, Debra S.
author_facet Gallagher, Suzanne Renick
Coon, William
Donley, Kristin
Scott, Abby
Goldberg, Debra S.
author_sort Gallagher, Suzanne Renick
collection PubMed
description Computer science has become ubiquitous in many areas of biological research, yet most high school and even college students are unaware of this. As a result, many college biology majors graduate without adequate computational skills for contemporary fields of biology. The absence of a computational element in secondary school biology classrooms is of growing concern to the computational biology community and biology teachers who would like to acquaint their students with updated approaches in the discipline. We present a first attempt to correct this absence by introducing a computational biology element to teach genetic evolution into advanced biology classes in two local high schools. Our primary goal was to show students how computation is used in biology and why a basic understanding of computation is necessary for research in many fields of biology. This curriculum is intended to be taught by a computational biologist who has worked with a high school advanced biology teacher to adapt the unit for his/her classroom, but a motivated high school teacher comfortable with mathematics and computing may be able to teach this alone. In this paper, we present our curriculum, which takes into consideration the constraints of the required curriculum, and discuss our experiences teaching it. We describe the successes and challenges we encountered while bringing this unit to high school students, discuss how we addressed these challenges, and make suggestions for future versions of this curriculum.We believe that our curriculum can be a valuable seed for further development of computational activities aimed at high school biology students. Further, our experiences may be of value to others teaching computational biology at this level. Our curriculum can be obtained at http://ecsite.cs.colorado.edu/?page_id=149#biology or by contacting the authors.
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spelling pubmed-32030552011-11-01 A First Attempt to Bring Computational Biology into Advanced High School Biology Classrooms Gallagher, Suzanne Renick Coon, William Donley, Kristin Scott, Abby Goldberg, Debra S. PLoS Comput Biol Education Computer science has become ubiquitous in many areas of biological research, yet most high school and even college students are unaware of this. As a result, many college biology majors graduate without adequate computational skills for contemporary fields of biology. The absence of a computational element in secondary school biology classrooms is of growing concern to the computational biology community and biology teachers who would like to acquaint their students with updated approaches in the discipline. We present a first attempt to correct this absence by introducing a computational biology element to teach genetic evolution into advanced biology classes in two local high schools. Our primary goal was to show students how computation is used in biology and why a basic understanding of computation is necessary for research in many fields of biology. This curriculum is intended to be taught by a computational biologist who has worked with a high school advanced biology teacher to adapt the unit for his/her classroom, but a motivated high school teacher comfortable with mathematics and computing may be able to teach this alone. In this paper, we present our curriculum, which takes into consideration the constraints of the required curriculum, and discuss our experiences teaching it. We describe the successes and challenges we encountered while bringing this unit to high school students, discuss how we addressed these challenges, and make suggestions for future versions of this curriculum.We believe that our curriculum can be a valuable seed for further development of computational activities aimed at high school biology students. Further, our experiences may be of value to others teaching computational biology at this level. Our curriculum can be obtained at http://ecsite.cs.colorado.edu/?page_id=149#biology or by contacting the authors. Public Library of Science 2011-10-27 /pmc/articles/PMC3203055/ /pubmed/22046118 http://dx.doi.org/10.1371/journal.pcbi.1002244 Text en Gallagher et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Education
Gallagher, Suzanne Renick
Coon, William
Donley, Kristin
Scott, Abby
Goldberg, Debra S.
A First Attempt to Bring Computational Biology into Advanced High School Biology Classrooms
title A First Attempt to Bring Computational Biology into Advanced High School Biology Classrooms
title_full A First Attempt to Bring Computational Biology into Advanced High School Biology Classrooms
title_fullStr A First Attempt to Bring Computational Biology into Advanced High School Biology Classrooms
title_full_unstemmed A First Attempt to Bring Computational Biology into Advanced High School Biology Classrooms
title_short A First Attempt to Bring Computational Biology into Advanced High School Biology Classrooms
title_sort first attempt to bring computational biology into advanced high school biology classrooms
topic Education
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3203055/
https://www.ncbi.nlm.nih.gov/pubmed/22046118
http://dx.doi.org/10.1371/journal.pcbi.1002244
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