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Changes in the tension in dsDNA alter the conformation of RecA bound to dsDNA–RecA filaments

The RecA protein is an ATPase that mediates recombination via strand exchange. In strand exchange a single-stranded DNA (ssDNA) bound to RecA binding site I in a RecA/ssDNA filament pairs with one strand of a double-stranded DNA (dsDNA) and forms heteroduplex dsDNA in site I if homology is encounter...

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Autores principales: Conover, Alyson J., Danilowicz, Claudia, Gunaratne, Ruwan, Coljee, Vincent W., Kleckner, Nancy, Prentiss, Mara
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3203582/
https://www.ncbi.nlm.nih.gov/pubmed/21768124
http://dx.doi.org/10.1093/nar/gkr561
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author Conover, Alyson J.
Danilowicz, Claudia
Gunaratne, Ruwan
Coljee, Vincent W.
Kleckner, Nancy
Prentiss, Mara
author_facet Conover, Alyson J.
Danilowicz, Claudia
Gunaratne, Ruwan
Coljee, Vincent W.
Kleckner, Nancy
Prentiss, Mara
author_sort Conover, Alyson J.
collection PubMed
description The RecA protein is an ATPase that mediates recombination via strand exchange. In strand exchange a single-stranded DNA (ssDNA) bound to RecA binding site I in a RecA/ssDNA filament pairs with one strand of a double-stranded DNA (dsDNA) and forms heteroduplex dsDNA in site I if homology is encountered. Long sequences are exchanged in a dynamic process in which initially unbound dsDNA binds to the leading end of a RecA/ssDNA filament, while heteroduplex dsDNA unbinds from the lagging end via ATP hydrolysis. ATP hydrolysis is required to convert the active RecA conformation, which cannot unbind, to the inactive conformation, which can unbind. If dsDNA extension due to RecA binding increases the dsDNA tension, then RecA unbinding must decrease tension. We show that in the presence of ATP hydrolysis decreases in tension induce decreases in length whereas in the absence of hydrolysis, changes in tension have no systematic effect. These results suggest that decreases in force enhance dissociation by promoting transitions from the active to the inactive RecA conformation. In contrast, increases in tension reduce dissociation. Thus, the changes in tension inherent to strand exchange may couple with ATP hydrolysis to increase the directionality and stringency of strand exchange.
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spelling pubmed-32035822011-10-28 Changes in the tension in dsDNA alter the conformation of RecA bound to dsDNA–RecA filaments Conover, Alyson J. Danilowicz, Claudia Gunaratne, Ruwan Coljee, Vincent W. Kleckner, Nancy Prentiss, Mara Nucleic Acids Res Nucleic Acid Enzymes The RecA protein is an ATPase that mediates recombination via strand exchange. In strand exchange a single-stranded DNA (ssDNA) bound to RecA binding site I in a RecA/ssDNA filament pairs with one strand of a double-stranded DNA (dsDNA) and forms heteroduplex dsDNA in site I if homology is encountered. Long sequences are exchanged in a dynamic process in which initially unbound dsDNA binds to the leading end of a RecA/ssDNA filament, while heteroduplex dsDNA unbinds from the lagging end via ATP hydrolysis. ATP hydrolysis is required to convert the active RecA conformation, which cannot unbind, to the inactive conformation, which can unbind. If dsDNA extension due to RecA binding increases the dsDNA tension, then RecA unbinding must decrease tension. We show that in the presence of ATP hydrolysis decreases in tension induce decreases in length whereas in the absence of hydrolysis, changes in tension have no systematic effect. These results suggest that decreases in force enhance dissociation by promoting transitions from the active to the inactive RecA conformation. In contrast, increases in tension reduce dissociation. Thus, the changes in tension inherent to strand exchange may couple with ATP hydrolysis to increase the directionality and stringency of strand exchange. Oxford University Press 2011-11 2011-07-18 /pmc/articles/PMC3203582/ /pubmed/21768124 http://dx.doi.org/10.1093/nar/gkr561 Text en © The Author(s) 2011. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Nucleic Acid Enzymes
Conover, Alyson J.
Danilowicz, Claudia
Gunaratne, Ruwan
Coljee, Vincent W.
Kleckner, Nancy
Prentiss, Mara
Changes in the tension in dsDNA alter the conformation of RecA bound to dsDNA–RecA filaments
title Changes in the tension in dsDNA alter the conformation of RecA bound to dsDNA–RecA filaments
title_full Changes in the tension in dsDNA alter the conformation of RecA bound to dsDNA–RecA filaments
title_fullStr Changes in the tension in dsDNA alter the conformation of RecA bound to dsDNA–RecA filaments
title_full_unstemmed Changes in the tension in dsDNA alter the conformation of RecA bound to dsDNA–RecA filaments
title_short Changes in the tension in dsDNA alter the conformation of RecA bound to dsDNA–RecA filaments
title_sort changes in the tension in dsdna alter the conformation of reca bound to dsdna–reca filaments
topic Nucleic Acid Enzymes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3203582/
https://www.ncbi.nlm.nih.gov/pubmed/21768124
http://dx.doi.org/10.1093/nar/gkr561
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