Cargando…
The Mechanism of Formation of N-Formylkynurenine by Heme Dioxygenases
[Image: see text] Heme dioxygenases catalyze the oxidation of l-tryptophan to N-formylkynurenine (NFK), the first and rate-limiting step in tryptophan catabolism. Although recent progress has been made on early stages in the mechanism, there is currently no experimental data on the mechanism of prod...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2011
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3210546/ https://www.ncbi.nlm.nih.gov/pubmed/21892828 http://dx.doi.org/10.1021/ja207066z |
_version_ | 1782215740009480192 |
---|---|
author | Basran, Jaswir Efimov, Igor Chauhan, Nishma Thackray, Sarah J. Krupa, James L. Eaton, Graham Griffith, Gerry A. Mowat, Christopher G. Handa, Sandeep Raven, Emma Lloyd |
author_facet | Basran, Jaswir Efimov, Igor Chauhan, Nishma Thackray, Sarah J. Krupa, James L. Eaton, Graham Griffith, Gerry A. Mowat, Christopher G. Handa, Sandeep Raven, Emma Lloyd |
author_sort | Basran, Jaswir |
collection | PubMed |
description | [Image: see text] Heme dioxygenases catalyze the oxidation of l-tryptophan to N-formylkynurenine (NFK), the first and rate-limiting step in tryptophan catabolism. Although recent progress has been made on early stages in the mechanism, there is currently no experimental data on the mechanism of product (NFK) formation. In this work, we have used mass spectrometry to examine product formation in a number of dioxygenases. In addition to NFK formation (m/z = 237), the data identify a species (m/z = 221) that is consistent with insertion of a single atom of oxygen into the substrate during O(2)-driven turnover. The fragmentation pattern for this m/z = 221 species is consistent with a cyclic amino acetal structure; independent chemical synthesis of the 3a-hydroxypyrroloindole-2-carboxylic acid compound is in agreement with this assignment. Labeling experiments with (18)O(2) confirm the origin of the oxygen atom as arising from O(2)-dependent turnover. These data suggest that the dioxygenases use a ring-opening mechanism during NFK formation, rather than Criegee or dioxetane mechanisms as previously proposed. |
format | Online Article Text |
id | pubmed-3210546 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-32105462011-11-08 The Mechanism of Formation of N-Formylkynurenine by Heme Dioxygenases Basran, Jaswir Efimov, Igor Chauhan, Nishma Thackray, Sarah J. Krupa, James L. Eaton, Graham Griffith, Gerry A. Mowat, Christopher G. Handa, Sandeep Raven, Emma Lloyd J Am Chem Soc [Image: see text] Heme dioxygenases catalyze the oxidation of l-tryptophan to N-formylkynurenine (NFK), the first and rate-limiting step in tryptophan catabolism. Although recent progress has been made on early stages in the mechanism, there is currently no experimental data on the mechanism of product (NFK) formation. In this work, we have used mass spectrometry to examine product formation in a number of dioxygenases. In addition to NFK formation (m/z = 237), the data identify a species (m/z = 221) that is consistent with insertion of a single atom of oxygen into the substrate during O(2)-driven turnover. The fragmentation pattern for this m/z = 221 species is consistent with a cyclic amino acetal structure; independent chemical synthesis of the 3a-hydroxypyrroloindole-2-carboxylic acid compound is in agreement with this assignment. Labeling experiments with (18)O(2) confirm the origin of the oxygen atom as arising from O(2)-dependent turnover. These data suggest that the dioxygenases use a ring-opening mechanism during NFK formation, rather than Criegee or dioxetane mechanisms as previously proposed. American Chemical Society 2011-09-05 2011-10-12 /pmc/articles/PMC3210546/ /pubmed/21892828 http://dx.doi.org/10.1021/ja207066z Text en Copyright © 2011 American Chemical Society http://pubs.acs.org This is an open-access article distributed under the ACS AuthorChoice Terms & Conditions. Any use of this article, must conform to the terms of that license which are available at http://pubs.acs.org. |
spellingShingle | Basran, Jaswir Efimov, Igor Chauhan, Nishma Thackray, Sarah J. Krupa, James L. Eaton, Graham Griffith, Gerry A. Mowat, Christopher G. Handa, Sandeep Raven, Emma Lloyd The Mechanism of Formation of N-Formylkynurenine by Heme Dioxygenases |
title | The Mechanism of Formation of N-Formylkynurenine by Heme Dioxygenases |
title_full | The Mechanism of Formation of N-Formylkynurenine by Heme Dioxygenases |
title_fullStr | The Mechanism of Formation of N-Formylkynurenine by Heme Dioxygenases |
title_full_unstemmed | The Mechanism of Formation of N-Formylkynurenine by Heme Dioxygenases |
title_short | The Mechanism of Formation of N-Formylkynurenine by Heme Dioxygenases |
title_sort | mechanism of formation of n-formylkynurenine by heme dioxygenases |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3210546/ https://www.ncbi.nlm.nih.gov/pubmed/21892828 http://dx.doi.org/10.1021/ja207066z |
work_keys_str_mv | AT basranjaswir themechanismofformationofnformylkynureninebyhemedioxygenases AT efimovigor themechanismofformationofnformylkynureninebyhemedioxygenases AT chauhannishma themechanismofformationofnformylkynureninebyhemedioxygenases AT thackraysarahj themechanismofformationofnformylkynureninebyhemedioxygenases AT krupajamesl themechanismofformationofnformylkynureninebyhemedioxygenases AT eatongraham themechanismofformationofnformylkynureninebyhemedioxygenases AT griffithgerrya themechanismofformationofnformylkynureninebyhemedioxygenases AT mowatchristopherg themechanismofformationofnformylkynureninebyhemedioxygenases AT handasandeep themechanismofformationofnformylkynureninebyhemedioxygenases AT ravenemmalloyd themechanismofformationofnformylkynureninebyhemedioxygenases AT basranjaswir mechanismofformationofnformylkynureninebyhemedioxygenases AT efimovigor mechanismofformationofnformylkynureninebyhemedioxygenases AT chauhannishma mechanismofformationofnformylkynureninebyhemedioxygenases AT thackraysarahj mechanismofformationofnformylkynureninebyhemedioxygenases AT krupajamesl mechanismofformationofnformylkynureninebyhemedioxygenases AT eatongraham mechanismofformationofnformylkynureninebyhemedioxygenases AT griffithgerrya mechanismofformationofnformylkynureninebyhemedioxygenases AT mowatchristopherg mechanismofformationofnformylkynureninebyhemedioxygenases AT handasandeep mechanismofformationofnformylkynureninebyhemedioxygenases AT ravenemmalloyd mechanismofformationofnformylkynureninebyhemedioxygenases |