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In silico characterization of microbial electrosynthesis for metabolic engineering of biochemicals

BACKGROUND: A critical concern in metabolic engineering is the need to balance the demand and supply of redox intermediates such as NADH. Bioelectrochemical techniques offer a novel and promising method to alleviate redox imbalances during the synthesis of biochemicals and biofuels. Broadly, these t...

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Autores principales: Pandit, Aditya V, Mahadevan, Radhakrishnan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3215969/
https://www.ncbi.nlm.nih.gov/pubmed/21967745
http://dx.doi.org/10.1186/1475-2859-10-76
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author Pandit, Aditya V
Mahadevan, Radhakrishnan
author_facet Pandit, Aditya V
Mahadevan, Radhakrishnan
author_sort Pandit, Aditya V
collection PubMed
description BACKGROUND: A critical concern in metabolic engineering is the need to balance the demand and supply of redox intermediates such as NADH. Bioelectrochemical techniques offer a novel and promising method to alleviate redox imbalances during the synthesis of biochemicals and biofuels. Broadly, these techniques reduce intracellular NAD(+ )to NADH and therefore manipulate the cell's redox balance. The cellular response to such redox changes and the additional reducing power available to the cell can be harnessed to produce desired metabolites. In the context of microbial fermentation, these bioelectrochemical techniques can be used to improve product yields and/or productivity. RESULTS: We have developed a method to characterize the role of bioelectrosynthesis in chemical production using the genome-scale metabolic model of E. coli. The results in this paper elucidate the role of bioelectrosynthesis and its impact on biomass growth, cellular ATP yields and biochemical production. The results also suggest that strain design strategies can change for fermentation processes that employ microbial electrosynthesis and suggest that dynamic operating strategies lead to maximizing productivity. CONCLUSIONS: The results in this paper provide a systematic understanding of the benefits and limitations of bioelectrochemical techniques for biochemical production and highlight how electrical enhancement can impact cellular metabolism and biochemical production.
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spelling pubmed-32159692011-11-16 In silico characterization of microbial electrosynthesis for metabolic engineering of biochemicals Pandit, Aditya V Mahadevan, Radhakrishnan Microb Cell Fact Research BACKGROUND: A critical concern in metabolic engineering is the need to balance the demand and supply of redox intermediates such as NADH. Bioelectrochemical techniques offer a novel and promising method to alleviate redox imbalances during the synthesis of biochemicals and biofuels. Broadly, these techniques reduce intracellular NAD(+ )to NADH and therefore manipulate the cell's redox balance. The cellular response to such redox changes and the additional reducing power available to the cell can be harnessed to produce desired metabolites. In the context of microbial fermentation, these bioelectrochemical techniques can be used to improve product yields and/or productivity. RESULTS: We have developed a method to characterize the role of bioelectrosynthesis in chemical production using the genome-scale metabolic model of E. coli. The results in this paper elucidate the role of bioelectrosynthesis and its impact on biomass growth, cellular ATP yields and biochemical production. The results also suggest that strain design strategies can change for fermentation processes that employ microbial electrosynthesis and suggest that dynamic operating strategies lead to maximizing productivity. CONCLUSIONS: The results in this paper provide a systematic understanding of the benefits and limitations of bioelectrochemical techniques for biochemical production and highlight how electrical enhancement can impact cellular metabolism and biochemical production. BioMed Central 2011-10-03 /pmc/articles/PMC3215969/ /pubmed/21967745 http://dx.doi.org/10.1186/1475-2859-10-76 Text en Copyright ©2011 Pandit and Mahadevan; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Pandit, Aditya V
Mahadevan, Radhakrishnan
In silico characterization of microbial electrosynthesis for metabolic engineering of biochemicals
title In silico characterization of microbial electrosynthesis for metabolic engineering of biochemicals
title_full In silico characterization of microbial electrosynthesis for metabolic engineering of biochemicals
title_fullStr In silico characterization of microbial electrosynthesis for metabolic engineering of biochemicals
title_full_unstemmed In silico characterization of microbial electrosynthesis for metabolic engineering of biochemicals
title_short In silico characterization of microbial electrosynthesis for metabolic engineering of biochemicals
title_sort in silico characterization of microbial electrosynthesis for metabolic engineering of biochemicals
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3215969/
https://www.ncbi.nlm.nih.gov/pubmed/21967745
http://dx.doi.org/10.1186/1475-2859-10-76
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