Cargando…

Tandemly repeated DNA families in the mouse genome

BACKGROUND: Functional and morphological studies of tandem DNA repeats, that combine high portion of most genomes, are mostly limited due to the incomplete characterization of these genome elements. We report here a genome wide analysis of the large tandem repeats (TR) found in the mouse genome asse...

Descripción completa

Detalles Bibliográficos
Autores principales:	Komissarov, Aleksey S, Gavrilova, Ekaterina V, Demin, Sergey Ju, Ishov, Alexander M, Podgornaya, Olga I
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2011
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3218096/ https://www.ncbi.nlm.nih.gov/pubmed/22035034 http://dx.doi.org/10.1186/1471-2164-12-531

Ejemplares similares

Analysis of the largest tandemly repeated DNA families in the human genome
por: Warburton, Peter E, et al.
Publicado: (2008)

Mouse chromocenters DNA content: sequencing and in silico analysis
por: Ostromyshenskii, Dmitrii I., et al.
Publicado: (2018)

Tandem Repeat Diversity in Two Closely Related Hamster Species—The Chinese Hamster (Cricetulus griseus) and Striped Hamster (Cricetulus barabensis)
por: Ivanova, Nadezhda G., et al.
Publicado: (2022)

Human pericentromeric tandemly repeated DNA is transcribed at the end of oocyte maturation and is associated with membraneless mitochondria-associated structures
por: Dobrynin, M. A., et al.
Publicado: (2020)

The complete mitochondrial genome of the parthenogenetic Caucasian rock lizard Darevskia unisexualis (Squamata: lacertidae) contains long tandem repeat formed by 59 bp monomer
por: Komissarov, Aleksey, et al.
Publicado: (2016)

Genome-wide analysis of tandem repeats in Tribolium castaneum genome reveals abundant and highly dynamic tandem repeat families with satellite DNA features in euchromatic chromosomal arms
por: Pavlek, Martina, et al.
Publicado: (2015)

Repeat or not repeat?—Statistical validation of tandem repeat prediction in genomic sequences
por: Schaper, Elke, et al.
Publicado: (2012)

The Genomic landscape of short tandem repeats across multiple ancestries
por: Vijayaraghavan, Prashanth, et al.
Publicado: (2023)

Medium-sized tandem repeats represent an abundant component of the Drosophila virilis genome
por: Abdurashitov, Murat A, et al.
Publicado: (2013)

Karyotype features of trematode Himasthla elongata
por: Solovyeva, Anna I., et al.
Publicado: (2016)

Database of exact tandem repeats in the Zebrafish genome
por: Rouchka, Eric C
Publicado: (2010)

Detection of tandem repeats in the Capsicum annuum genome
por: Rudenko, Valentina, et al.
Publicado: (2023)

Analysis of Short Tandem Repeats by Parallel DNA Threading
por: Zajac, Pawel, et al.
Publicado: (2009)

Tandem-genotypes: robust detection of tandem repeat expansions from long DNA reads
por: Mitsuhashi, Satomi, et al.
Publicado: (2019)

Genome-wide evaluation of the effect of short tandem repeat variation on local DNA methylation
por: Martin-Trujillo, Alejandro, et al.
Publicado: (2023)

Compendious survey of protein tandem repeats in inbred mouse strains
por: Arslan, Ahmed
Publicado: (2022)

Tandem repeat distribution of gene transcripts in three plant families
por: da Maia, Luciano Carlos, et al.
Publicado: (2009)

The mutational dynamics of short tandem repeats in large, multigenerational families
por: Steely, Cody J., et al.
Publicado: (2022)

Evolutionary Study of Protein Short Tandem Repeats in Protein Families
por: Mier, Pablo, et al.
Publicado: (2023)

Genomic abundance is not predictive of tandem repeat localization in grass genomes
por: Bilinski, Paul, et al.
Publicado: (2017)

Tandem repeat disorders
por: Ryan, Calen P
Publicado: (2019)

Systematic Profiling of Short Tandem Repeats in the Cattle Genome
por: Xu, Lingyang, et al.
Publicado: (2016)

Profiling the genome-wide landscape of tandem repeat expansions
por: Mousavi, Nima, et al.
Publicado: (2019)

Detection of Highly Divergent Tandem Repeats in the Rice Genome
por: Korotkov, Eugene V., et al.
Publicado: (2021)

Variable Number Tandem Repeats in the Mitochondrial DNA of Lentinula edodes
por: Kim, Sinil, et al.
Publicado: (2019)

Halibut mitochondrial genomes contain extensive heteroplasmic tandem repeat arrays involved in DNA recombination
por: Mjelle, Kenneth A, et al.
Publicado: (2008)

DNA polymerase stalling at structured DNA constrains the expansion of short tandem repeats
por: Murat, Pierre, et al.
Publicado: (2020)

DNA Fingerprinting: Use of Autosomal Short Tandem Repeats in Forensic DNA Typing
por: Keerti, Akshunna, et al.
Publicado: (2022)

An improved genome assembly uncovers prolific tandem repeats in Atlantic cod
por: Tørresen, Ole K., et al.
Publicado: (2017)

Large-scale analysis of tandem repeat variability in the human genome
por: Duitama, Jorge, et al.
Publicado: (2014)

Statistical Approaches to Detecting and Analyzing Tandem Repeats in Genomic Sequences
por: Anisimova, Maria, et al.
Publicado: (2015)

Significant Deviations in the Configurations of Homologous Tandem Repeats in Prokaryotic Genomes
por: Hirayama, Shintaro, et al.
Publicado: (2009)

Genome-Wide Analysis of Tandem Repeats in Plants and Green Algae
por: Zhao, Zhixin, et al.
Publicado: (2013)

Tandem Repeats and Repeatomes: Delving Deeper into the ‘Dark Matter’ of Genomes
por: Hannan, Anthony J.
Publicado: (2018)

The Dark Matter of Large Cereal Genomes: Long Tandem Repeats
por: Kapustová, Veronika, et al.
Publicado: (2019)

Genome-wide tandem repeat expansions contribute to schizophrenia risk
por: Mojarad, Bahareh A., et al.
Publicado: (2022)

Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome
por: Kuznetsova, Inna S., et al.
Publicado: (2014)

Efficient acquisition of tens of thousands of short tandem repeats in single-cell whole-genome-amplified DNA
por: Tao, Liming, et al.
Publicado: (2021)

TRDB—The Tandem Repeats Database
por: Gelfand, Yevgeniy, et al.
Publicado: (2007)

Two-Step Recruitment of RNA-Directed DNA Methylation to Tandem Repeats
por: Chan, Simon W.-L, et al.
Publicado: (2006)

Cannot write session to /tmp/vufind_sessions/sess_129vvtc4eo18tfj80acqi6lb3b