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ICA-fNORM: Spatial Normalization of fMRI Data Using Intrinsic Group-ICA Networks

A common pre-processing challenge associated with group level fMRI analysis is spatial registration of multiple subjects to a standard space. Spatial normalization, using a reference image such as the Montreal Neurological Institute brain template, is the most common technique currently in use to ac...

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Autores principales: Khullar, Siddharth, Michael, Andrew M., Cahill, Nathan D., Kiehl, Kent A., Pearlson, Godfrey, Baum, Stefi A., Calhoun, Vince D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Research Foundation 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3218372/
https://www.ncbi.nlm.nih.gov/pubmed/22110427
http://dx.doi.org/10.3389/fnsys.2011.00093
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author Khullar, Siddharth
Michael, Andrew M.
Cahill, Nathan D.
Kiehl, Kent A.
Pearlson, Godfrey
Baum, Stefi A.
Calhoun, Vince D.
author_facet Khullar, Siddharth
Michael, Andrew M.
Cahill, Nathan D.
Kiehl, Kent A.
Pearlson, Godfrey
Baum, Stefi A.
Calhoun, Vince D.
author_sort Khullar, Siddharth
collection PubMed
description A common pre-processing challenge associated with group level fMRI analysis is spatial registration of multiple subjects to a standard space. Spatial normalization, using a reference image such as the Montreal Neurological Institute brain template, is the most common technique currently in use to achieve spatial congruence across multiple subjects. This method corrects for global shape differences preserving regional asymmetries, but does not account for functional differences. We propose a novel approach to co-register task-based fMRI data using resting state group-ICA networks. We posit that these intrinsic networks (INs) can provide to the spatial normalization process with important information about how each individual’s brain is organized functionally. The algorithm is initiated by the extraction of single subject representations of INs using group level independent component analysis (ICA) on resting state fMRI data. In this proof-of-concept work two of the robust, commonly identified, networks are chosen as functional templates. As an estimation step, the relevant INs are utilized to derive a set of normalization parameters for each subject. Finally, the normalization parameters are applied individually to a different set of fMRI data acquired while the subjects performed an auditory oddball task. These normalization parameters, although derived using rest data, generalize successfully to data obtained with a cognitive paradigm for each subject. The improvement in results is verified using two widely applied fMRI analysis methods: the general linear model and ICA. Resulting activation patterns from each analysis method show significant improvements in terms of detection sensitivity and statistical significance at the group level. The results presented in this article provide initial evidence to show that common functional domains from the resting state brain may be used to improve the group statistics of task-fMRI data.
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spelling pubmed-32183722011-11-21 ICA-fNORM: Spatial Normalization of fMRI Data Using Intrinsic Group-ICA Networks Khullar, Siddharth Michael, Andrew M. Cahill, Nathan D. Kiehl, Kent A. Pearlson, Godfrey Baum, Stefi A. Calhoun, Vince D. Front Syst Neurosci Neuroscience A common pre-processing challenge associated with group level fMRI analysis is spatial registration of multiple subjects to a standard space. Spatial normalization, using a reference image such as the Montreal Neurological Institute brain template, is the most common technique currently in use to achieve spatial congruence across multiple subjects. This method corrects for global shape differences preserving regional asymmetries, but does not account for functional differences. We propose a novel approach to co-register task-based fMRI data using resting state group-ICA networks. We posit that these intrinsic networks (INs) can provide to the spatial normalization process with important information about how each individual’s brain is organized functionally. The algorithm is initiated by the extraction of single subject representations of INs using group level independent component analysis (ICA) on resting state fMRI data. In this proof-of-concept work two of the robust, commonly identified, networks are chosen as functional templates. As an estimation step, the relevant INs are utilized to derive a set of normalization parameters for each subject. Finally, the normalization parameters are applied individually to a different set of fMRI data acquired while the subjects performed an auditory oddball task. These normalization parameters, although derived using rest data, generalize successfully to data obtained with a cognitive paradigm for each subject. The improvement in results is verified using two widely applied fMRI analysis methods: the general linear model and ICA. Resulting activation patterns from each analysis method show significant improvements in terms of detection sensitivity and statistical significance at the group level. The results presented in this article provide initial evidence to show that common functional domains from the resting state brain may be used to improve the group statistics of task-fMRI data. Frontiers Research Foundation 2011-11-17 /pmc/articles/PMC3218372/ /pubmed/22110427 http://dx.doi.org/10.3389/fnsys.2011.00093 Text en Copyright © 2011 Khullar, Michael, Cahill, Kiehl, Pearlson, Baum and Calhoun. http://www.frontiersin.org/licenseagreement This is an open-access article subject to a non-exclusive license between the authors and Frontiers Media SA, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and other Frontiers conditions are complied with.
spellingShingle Neuroscience
Khullar, Siddharth
Michael, Andrew M.
Cahill, Nathan D.
Kiehl, Kent A.
Pearlson, Godfrey
Baum, Stefi A.
Calhoun, Vince D.
ICA-fNORM: Spatial Normalization of fMRI Data Using Intrinsic Group-ICA Networks
title ICA-fNORM: Spatial Normalization of fMRI Data Using Intrinsic Group-ICA Networks
title_full ICA-fNORM: Spatial Normalization of fMRI Data Using Intrinsic Group-ICA Networks
title_fullStr ICA-fNORM: Spatial Normalization of fMRI Data Using Intrinsic Group-ICA Networks
title_full_unstemmed ICA-fNORM: Spatial Normalization of fMRI Data Using Intrinsic Group-ICA Networks
title_short ICA-fNORM: Spatial Normalization of fMRI Data Using Intrinsic Group-ICA Networks
title_sort ica-fnorm: spatial normalization of fmri data using intrinsic group-ica networks
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3218372/
https://www.ncbi.nlm.nih.gov/pubmed/22110427
http://dx.doi.org/10.3389/fnsys.2011.00093
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